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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 391 95

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 115 15

  3. spaceranger spaceranger Public

    Rust 2

Repositories

Showing 10 of 71 repositories
  • zarr Public Forked from preyasshah/zarr

    Rust implementation of the Zarr N-dimensional array format.

    10XGenomics/zarr’s past year of commit activity
    Rust 1 Apache-2.0 5 0 1 Updated Apr 8, 2025
  • intel-mkl-src Public Forked from rust-math/intel-mkl-src

    Redistribute Intel MKL as a crate

    10XGenomics/intel-mkl-src’s past year of commit activity
    Rust 1 24 0 5 Updated Apr 8, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 17 MIT 3 0 3 Updated Apr 7, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 8 10 1 0 Updated Mar 27, 2025
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    10XGenomics/bamtofastq’s past year of commit activity
    Rust 62 MIT 7 17 13 Updated Mar 25, 2025
  • rules_conda Public

    Bazel rules for creating conda environments

    10XGenomics/rules_conda’s past year of commit activity
    Go 5 MIT 1 3 2 Updated Mar 24, 2025
  • rkm Public Forked from genbattle/rkm

    Generic k-means implementation written in Rust

    10XGenomics/rkm’s past year of commit activity
    Rust 0 9 0 0 Updated Mar 20, 2025
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity
    R 58 4 1 0 Updated Mar 19, 2025
  • rust-shardio Public

    Out-of-memory sorting of large datasets map / reduce style processing

    10XGenomics/rust-shardio’s past year of commit activity
    Rust 47 MIT 4 3 3 Updated Mar 10, 2025
  • enclone Public

    VDJ Clonotyping & Analysis Tools

    10XGenomics/enclone’s past year of commit activity
    Rust 49 14 4 0 Updated Mar 7, 2025
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