Skip to content

Pull requests: AI2Science/vizfold-foundation

New pull request New
44 Open 22 Closed
44 Open 22 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Attention Rollout Computation and Heatmap Visualization
#79 opened Apr 30, 2026 by philipxunwu Loading…
Combine Previous Heatmap Visualizations Implementations
#77 opened Apr 30, 2026 by BLee654 Loading…
Add Contact Map with Triangle Attention Overlay
#75 opened Apr 29, 2026 by salammurillo Loading…
added visualization adapter for offline trace integration
#74 opened Apr 29, 2026 by sherrylicodes Loading…
1
Issue #8 Visualize Intermediate Representations
#73 opened Apr 29, 2026 by SreeDan Loading…
1
Refactor visualizations into modular files and added chord diagram support
#72 opened Apr 28, 2026 by ssagili3 Loading…
1
1
Add Evoformer extraction hooks for intermediate MSA and pair representations
#71 opened Apr 28, 2026 by PranavNarala1 Loading…
1
Module Refactor
#70 opened Apr 27, 2026 by katamyra Loading…
Build Streamlit Frontend WebUI for VizFold trace visualization Issue #41
#69 opened Apr 26, 2026 by DevP1130 Loading…
4
Automate OpenFold & VizFold-Foundation HPC Setup (Fixes #5)
#68 opened Apr 25, 2026 by JeevanandanRamasamy Loading…
1
1
Create CLIs for full OpenFold pipeline
#67 opened Apr 23, 2026 by nipun-khanna Loading…
3
VizFold zarr archive for inference traces (issue 39), ksuleimanova
#65 opened Apr 14, 2026 by ksuleimanova Loading…
Zarr Archive Format for Inference Traces (Issue #39)
#62 opened Apr 13, 2026 by Rosette2237 Loading…
1
2
Archive Utils Final PR
#59 opened Mar 23, 2026 by adeshusa Loading…
Add ESMFold backend smoke test and reproducibility documentation
#58 opened Mar 22, 2026 by Mose-Kim02 Loading…
6
Boltz web runner
#57 opened Mar 20, 2026 by Vishram1123 Loading…
ESMFold Backend Inference and Tensor Extraction (Issue #43)
#54 opened Mar 9, 2026 by rohan5986 Loading…
2
Design a Standardized Archive Format for Inference Traces - Issue #39
#53 opened Mar 9, 2026 by purvikathalkar Loading…
1
Add Zarr archive and specification for ViT-MNIST inference traces (issue 39)
#52 opened Mar 9, 2026 by Rosette2237 Loading…
Offline Visualization of Inference Traces
#47 opened Mar 5, 2026 by archbilesherman Loading…
1
Issue 42: add Boltz tracing + SLURM runner + docs
#45 opened Feb 22, 2026 by ArishV1 Loading…
3
Integrate ESMFold inference backend into VizFold (structure export + metadata)
#44 opened Feb 21, 2026 by jayvenn21 Loading…
1
14
Add intermediate structure metrics module (TM-score, lDDT)
#36 opened Dec 9, 2025 by sherrylicodes Loading…
Adding top-k attention edges script
#35 opened Dec 8, 2025 by naman-goyall Loading…
5
added cli to generate attention vis
#33 opened Dec 8, 2025 by SreeDan Loading…
4
ProTip! Type g i on any issue or pull request to go back to the issue listing page.