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@BV-BRC

Bacterial and Viral Bioinformatics Resource Center

Software repository for the Bacterial and Viral Bioinformatics Resource Center (BV-BRC) project.

The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is an information system designed to support the biomedical research community’s work on bacterial and viral infectious diseases via integration of vital pathogen information with rich data and analysis tools. BV-BRC combines the data, technology, and extensive user communities from two long-running centers: PATRIC, the bacterial system , and IRD/ViPR, the viral systems. In addition to hundreds of thousands of bacterial genomes in PATRIC and over a million viral genomes in IRD/ViPR, the two resources host data on protein structure and function, clinical studies, drug targets and resistance, epidemiology, and other features, and provide open source tools for data analysis and genomic annotation.

Learn more about BV-BRC.

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  1. BV-BRC-Web BV-BRC-Web Public

    The BV-BRC Web Application

    JavaScript 8 23

  2. BV-BRC-Docs BV-BRC-Docs Public

    The BV-BRC Documentation

    Python 4 11

  3. BV-BRC-CLI BV-BRC-CLI Public

    The BV-BRC Command Line Interface

    13 2

  4. BV-BRC-API BV-BRC-API Public

    This repository contains source code for BV-BRC Data API service

    CSS 5 12

Repositories

Showing 10 of 92 repositories
  • BV-BRC-Web Public

    The BV-BRC Web Application

    BV-BRC/BV-BRC-Web’s past year of commit activity
    JavaScript 8 MIT 23 1 8 Updated Apr 22, 2025
  • BV-BRC/bvbrc_CoreGenomeMLST’s past year of commit activity
    Perl 0 1 0 0 Updated Apr 18, 2025
  • bvbrc_lovan Public

    Wrapper for Jim Davis' lovan viral annotation tool.

    BV-BRC/bvbrc_lovan’s past year of commit activity
    Makefile 0 0 0 0 Updated Apr 17, 2025
  • BV-BRC/bvbrc_ceirr_data_submission’s past year of commit activity
    Perl 0 1 0 0 Updated Apr 16, 2025
  • BV-BRC/bvbrc_WholeGenomeSNPAnalysis’s past year of commit activity
    Perl 0 1 0 0 Updated Apr 14, 2025
  • BV-BRC/bvbrc_TreeSort’s past year of commit activity
    Makefile 0 0 0 0 Updated Apr 2, 2025
  • runtime_build Public
    BV-BRC/runtime_build’s past year of commit activity
    Perl 0 MIT 1 0 0 Updated Apr 2, 2025
  • BV-BRC-API Public

    This repository contains source code for BV-BRC Data API service

    BV-BRC/BV-BRC-API’s past year of commit activity
    CSS 5 MIT 12 2 9 Updated Mar 31, 2025
  • BV-BRC-Docs Public

    The BV-BRC Documentation

    BV-BRC/BV-BRC-Docs’s past year of commit activity
    Python 4 11 0 0 Updated Mar 28, 2025
  • p3_assembly Public
    BV-BRC/p3_assembly’s past year of commit activity
    Python 0 MIT 4 0 0 Updated Mar 27, 2025