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Update to GATK 3.6

Status: Open.

#52 In BauerLab/ngsane;

· BauerLab opened on Jul 26, 2016

Unable to export EC2 image

Status: Open.

#51 In BauerLab/ngsane;

· geopcgeo opened on May 4, 2016

SamVar

Status: Open.

#47 In BauerLab/ngsane;

· BauerLab opened on Oct 24, 2014

·  

0.5.2.p1

non-standard characters in input files/folders

bug

enhancement

Status: Open.

#42 In BauerLab/ngsane;

· noncodo opened on Jul 28, 2014

Brush up Annovar annotation for SNPs

enhancement

Status: Open.

#39 In BauerLab/ngsane;

· BauerLab opened on Apr 23, 2014

Consider using Cram or Bam adjustments to cut down on filesize

enhancement

Status: Open.

#29 In BauerLab/ngsane;

· Gurado opened on Feb 7, 2014

·  

0.6.0

Breakdancer

Status: Open.

#18 In BauerLab/ngsane;

· BauerLab opened on Jan 15, 2014

·  

0.6.0

Recal needs .dict check

Status: Open.

#15 In BauerLab/ngsane;

· BauerLab opened on Nov 19, 2013

Create bam2fastq module

Status: Open.

#14 In BauerLab/ngsane;

· BauerLab opened on Nov 12, 2013

·  

0.6.0

checkpoint enhancement

Status: Open.

#12 In BauerLab/ngsane;

· noncodo opened on Sep 25, 2013

Pipelines with keep

enhancement

Status: Open.

#11 In BauerLab/ngsane;

· allPowerde opened on Sep 24, 2013

Capture resrouce consumption on html Summary

enhancement

Status: Open.

#5 In BauerLab/ngsane;

· allPowerde opened on Aug 28, 2013