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Final update on the SBM #30

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sekulovskin wants to merge 23 commits into from
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Final update on the SBM #30

sekulovskin wants to merge 23 commits into from

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@sekulovskin sekulovskin commented Jan 21, 2025 •
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Main changes:

  • Computing the posterior probabilities for the number of components (clusters) given the sampled allocation vectors
  • Computing the estimated allocation of the nodes using Dahl's method
  • User-specified argument for the rate parameter of the Poisson prior on the number of clusters (lambda).

sekulovskin and others added 23 commits December 5, 2024 13:36
@sekulovskin
Update on the SBM prior: (1) now we save the sampled block allocation…
6caf7fc 
… parameters and block matrices (2) we sample the number of clusters by first calculating the probability of a sampled cluster configuration using Equation 3.7 pf Miller & Harrison (2018)
@sekulovskin
update the restriction on Kmax
6633a70
@sekulovskin
changes: (1) take out the option to save out_cluster_prob and (2) cha…
f74e723 
…nges K_max = no_variables + 10
@sekulovskin
take out saving K within the Gibbs sampler
4543486
@sekulovskin
Include the option to calculate the number of clusters and cluster al…
f25e2f0 
…locations
@sekulovskin
Merge branch 'main' of https://github.com/sekulovskin/bgms
21bedbc
@sekulovskin
update the references
02be0e9
@sekulovskin
Merge branch 'MaartenMarsman:main' into main
b83fc61
@sekulovskin
Update: Include the Rao-Rlackwellized estimates for the probabilities…
73d42b8 
… of the number of components
@sekulovskin
Update: Include the proper calculation of the probability of the numb…
28394fe 
…er of components. Also, some fixes in the roxygen code.
@sekulovskin
update: initial configuration of the cluster memberships.
b8f3de5
@sekulovskin
delete unnecessary object
7149ae1
@sekulovskin
correction to the truncated Poisson distribution
39e3ab0
@sekulovskin
update: randomize the order of the variables in the for loopp in the …
6a8ed38 
…block_allocations_mfm_sbm function
@sekulovskin
update: include a user-specified lambda
662d1c6
@sekulovskin
update SBM
12fd23b
@sekulovskin
update
42f0e86
@sekulovskin
sloving note: "Undefined global functions or variables: dpois"
2d4a8ac
@sekulovskin
solving notes and warning messages for the checks
ce8871d
@sekulovskin
export the summary_SBM function
1f09f8d
@sekulovskin
export summary_SBM function (needed when save = TRUE, as well as for …
75cca47 
…the easybgm implementation)
@sekulovskin
Udate in the documentation
8564e28
@sekulovskin
final update in the documentation
c7c2568
@sekulovskin sekulovskin closed this Feb 4, 2025
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@sekulovskin