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Updated minimum supported versions #67

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merged 2 commits into from
Feb 26, 2024
Merged

Updated minimum supported versions #67

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9db56b8
#66 updated minimum supported versions
kwabenantim Feb 26, 2024
86dbadd
#66 Remove unsupported python2 petsc configs
kwabenantim Feb 26, 2024
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6 changes: 3 additions & 3 deletions scripts/install_boost.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -78,9 +78,9 @@ major=${version_arr[0]}
minor=${version_arr[1]}
ver_si_on=${version//\./_} # Converts 1.69.0 to 1_69_0

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -lt 1) || ((${major} -eq 1) && (${minor} -lt 62)) ]]; then # Boost < 1.62.x
echo "$(basename $0): Boost versions < 1.62 not supported"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 1) || ((${major} -eq 1) && (${minor} -lt 67)) ]]; then # Boost < 1.67.x
echo "$(basename $0): Boost versions < 1.67 not supported"
exit 1
fi

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9 changes: 6 additions & 3 deletions scripts/install_cmake.sh
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Expand Up @@ -37,10 +37,13 @@ parallel="${parallel:-$(nproc)}"
version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}
patch=${version_arr[2]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -lt 3) || ((${major} -eq 3) && (${minor} -lt 5)) ]]; then # CMake < 3.5.x
echo "$(basename $0): CMake versions < 3.5 not supported"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 3)
|| ((${major} -eq 3) && (${minor} -lt 16))
|| ((${major} -eq 3) && (${minor} -eq 16) && (${patch} -lt 3)) ]]; then # CMake < 3.16.3
echo "$(basename $0): CMake versions < 3.16.3 not supported"
exit 1
fi

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83 changes: 14 additions & 69 deletions scripts/install_petsc_hdf5.sh
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Expand Up @@ -105,28 +105,25 @@ petsc_minor=${petsc_version_arr[1]}
hdf5_version_arr=(${hdf5_version//\./ })
hdf5_major=${hdf5_version_arr[0]}
hdf5_minor=${hdf5_version_arr[1]}
hdf5_patch=${hdf5_version_arr[2]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${petsc_major} -lt 3) || ((${petsc_major} -eq 3) && (${petsc_minor} -lt 7)) ]]; then # PETSc < 3.7.x
echo "$(basename $0): PETSc versions < 3.7 not supported"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${petsc_major} -lt 3)
|| ((${petsc_major} -eq 3) && (${petsc_minor} -lt 12)) ]]; then # PETSc < 3.12.x
echo "$(basename $0): PETSc versions < 3.12 not supported"
exit 1
fi

if [[ (${hdf5_major} -lt 1) || ((${hdf5_major} -eq 1) && (${hdf5_minor} -lt 10)) ]]; then # HDF5 < 1.10.x
echo "$(basename $0): HDF5 versions < 1.10 not supported"
if [[ (${hdf5_major} -lt 1)
|| ((${hdf5_major} -eq 1) && (${hdf5_minor} -lt 10))
|| ((${hdf5_major} -eq 1) && (${hdf5_minor} -eq 10) && (${hdf5_patch} -lt 4)) ]]; then # HDF5 < 1.10.4
echo "$(basename $0): HDF5 versions < 1.10.4 not supported"
exit 1
fi

# Preferred MPICH versions
URL_MPICH_3_3=https://www.mpich.org/static/downloads/3.3/mpich-3.3.tar.gz
URL_MPICH_3_4=https://www.mpich.org/static/downloads/3.4a3/mpich-3.4a3.tar.gz

# Fixes for broken Hypre links in some PETSc versions
URL_HYPRE_2_11=https://github.com/hypre-space/hypre/archive/refs/tags/v2.11.1.tar.gz
URL_HYPRE_2_12=https://github.com/hypre-space/hypre/archive/refs/tags/v2.12.0.tar.gz
URL_HYPRE_2_14=https://github.com/hypre-space/hypre/archive/refs/tags/v2.14.0.tar.gz
URL_HYPRE_2_15=https://github.com/hypre-space/hypre/archive/refs/tags/v2.15.1.tar.gz

# Retrieving packages to fix "url is not a tarball" errors
mkdir -p ${base_dir}/src/petsc_hdf5
cd ${base_dir}/src/petsc_hdf5
Expand All @@ -143,53 +140,7 @@ if [ -n "${mpich_version}" ]; then
download_mpich=$(pwd)/$(basename ${URL_MPICH})
fi

download_hypre=1
if [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 7) ]]; then # PETSc 3.7.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_3}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
fi

wget -nc ${URL_HYPRE_2_11} # Fixes broken hypre link in this version
download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_11})

elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 8) ]]; then # PETSc 3.8.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_3}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
fi

wget -nc ${URL_HYPRE_2_12} # Fixes broken hypre link in this version
download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_12})

elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 9) ]]; then # PETSc 3.9.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_3}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
fi

wget -nc ${URL_HYPRE_2_14} # Fixes broken hypre link in this version
download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_14})

elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 10) ]]; then # PETSc 3.10.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_3}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
fi

wget -nc ${URL_HYPRE_2_14} # Fixes broken hypre link in this version
download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_14})

elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 11) ]]; then # PETSc 3.11.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_3}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_3})
fi

wget -nc ${URL_HYPRE_2_15} # Fixes broken hypre link in this version
download_hypre=$(pwd)/$(basename ${URL_HYPRE_2_15})

elif [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 12) ]]; then # PETSc 3.12.x
if [[ (${petsc_major} -eq 3) && (${petsc_minor} -eq 12) ]]; then # PETSc 3.12.x
if [ -z "${mpich_version}" ]; then
wget -nc ${URL_MPICH_3_4}
download_mpich=$(pwd)/$(basename ${URL_MPICH_3_4})
Expand All @@ -212,12 +163,6 @@ if [[ (${petsc_major} -eq 3) && ((${petsc_minor} -eq 12) || (${petsc_minor} -eq
sed -i.bak 's/thread.isAlive()/thread.is_alive()/g' config/BuildSystem/script.py
fi

# Set Python version
PYTHON=python3
if [[ (${petsc_major} -lt 3) || ((${petsc_major} -eq 3) && (${petsc_minor} -lt 11)) ]]; then # PETSc < 3.11.x
PYTHON=python2
fi

# Build and install
cd ${install_dir}
export PETSC_DIR=$(pwd)
Expand All @@ -226,7 +171,7 @@ case ${petsc_arch} in

linux-gnu)
export PETSC_ARCH=linux-gnu
${PYTHON} ./configure \
python3 ./configure \
--with-make-np=${parallel} \
--with-cc=gcc \
--with-cxx=g++ \
Expand All @@ -240,14 +185,14 @@ case ${petsc_arch} in
--download-hdf5=${download_hdf5} \
--download-parmetis=1 \
--download-metis=1 \
--download-hypre=${download_hypre} \
--download-hypre=1 \
--with-shared-libraries && \
make -j ${parallel} all
;;

linux-gnu-opt)
export PETSC_ARCH=linux-gnu-opt
${PYTHON} ./configure \
python3 ./configure \
--with-make-np=${parallel} \
--with-cc=gcc \
--with-cxx=g++ \
Expand All @@ -259,7 +204,7 @@ case ${petsc_arch} in
--download-hdf5=${download_hdf5} \
--download-parmetis=1 \
--download-metis=1 \
--download-hypre=${download_hypre} \
--download-hypre=1 \
--with-shared-libraries \
--with-debugging=0 && \
make -j ${parallel} all
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13 changes: 4 additions & 9 deletions scripts/install_python.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -38,15 +38,10 @@ version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -eq 3) && (${minor} -lt 6) ]]; then # Python3 < 3.6.x
echo "$(basename $0): Python3 versions < 3.6 not supported"
exit 1
fi

# PETSc versions < 3.11.x need Python2 to configure builds
if [[ (${major} -eq 2) && (${minor} -lt 7) ]]; then # Python2 < 2.7.x
echo "$(basename $0): Python2 versions < 2.7 not supported (for building dependencies)"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 3)
|| ((${major} -eq 3) && (${minor} -lt 8)) ]]; then # Python < 3.8.x
echo "$(basename $0): Python3 versions < 3.8 not supported"
exit 1
fi

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7 changes: 4 additions & 3 deletions scripts/install_sundials.sh
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Expand Up @@ -72,9 +72,10 @@ version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -lt 2) || ((${major} -eq 2) && (${minor} -lt 7)) ]]; then # Sundials < 2.7.x
echo "$(basename $0): Sundials versions < 2.7 not supported"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 3)
|| ((${major} -eq 3) && (${minor} -lt 1)) ]]; then # Sundials < 3.1.x
echo "$(basename $0): Sundials versions < 3.1 not supported"
exit 1
fi

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5 changes: 3 additions & 2 deletions scripts/install_vtk.sh
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Expand Up @@ -84,8 +84,9 @@ version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -lt 6) || ((${major} -eq 6) && (${minor} -lt 3)) ]]; then # VTK < 6.3.x
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 6)
|| ((${major} -eq 6) && (${minor} -lt 3)) ]]; then # VTK < 6.3.x
echo "$(basename $0): VTK versions < 6.3 not supported"
exit 1
fi
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9 changes: 6 additions & 3 deletions scripts/install_xercesc.sh
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Expand Up @@ -72,10 +72,13 @@ ver_si_on=${version//\./_} # Converts 3.1.1 to 3_1_1
version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}
patch=${version_arr[2]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
if [[ (${major} -lt 3) || ((${major} -eq 3) && (${minor} -lt 2)) ]]; then # Xerces-C < 3.2.x
echo "$(basename $0): Xerces-C versions < 3.2 not supported"
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [[ (${major} -lt 3)
|| ((${major} -eq 3) && (${minor} -lt 2))
|| ((${major} -eq 3) && (${minor} -eq 2) && (${patch} -lt 1)) ]]; then # Xerces-C < 3.2.1
echo "$(basename $0): Xerces-C versions < 3.2.1 not supported"
exit 1
fi

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2 changes: 1 addition & 1 deletion scripts/install_xsd.sh
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Expand Up @@ -66,7 +66,7 @@ version_arr=(${version//\./ })
major=${version_arr[0]}
minor=${version_arr[1]}

# Unsupported versions: https://github.com/Chaste/dependency-modules/wiki
# Unsupported versions: https://chaste.github.io/docs/installguides/dependency-versions/
if [ ${major} -lt 4 ]; then # XSD < 4.0.x
echo "$(basename $0): XSD versions < 4.0 not supported"
exit 1
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