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Chrisdoan9/README.md

👋 Hi there, I’m Chris Doan

I am a bioinformatician passionate about analyzing omics data, applying machine learning, and building reproducible pipelines. My long-term goal is to contribute to research that helps slow down aging and understand the molecular mechanisms of age-related diseases.

Current Focus

I’m currently working at Boston University on Alzheimer’s disease research. My projects involve:

  • Pathway analysis and modeling using GSVA, fgsea, and linear regression (manuscripts in preparation)
  • Cell cell interaction analysis (manuscripts in preparation)
  • Spatial transcriptomics analysis using Visium and MERFISH data

Tools & Technologies

  • Languages: R, Python, Bash, R Shiny

Pinned Loading

  1. Markov_model Markov_model Public

    Python

  2. Multiome Multiome Public

    scRNA-seq + scATAC-seq

    R

  3. scRNA-seq scRNA-seq Public

    compare diseased vs healthy sample

  4. scATAC-Seq scATAC-Seq Public

  5. scRNA-Seq_nature_paper scRNA-Seq_nature_paper Public

    1

  6. stroke-prediction-web-app stroke-prediction-web-app Public