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Folders links revised #1227

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edfae8b
feat: Implement a grid and list layout options in the Library table
PintoGideon Aug 21, 2024
1d88179
feat: Cleanup
PintoGideon Aug 21, 2024
c6a5ee9
fix: Fix load data on scroll for the library page
PintoGideon Aug 21, 2024
15921cd
fix: Fix load data on scroll for the library page
PintoGideon Aug 22, 2024
8e5375d
feat: Update the location of the layout switch button
PintoGideon Aug 22, 2024
711dbb5
feat: Update how queries are refetched or invalidated
PintoGideon Aug 22, 2024
b3c1d2b
fix: Cleanup
PintoGideon Aug 22, 2024
b0ea26d
feat: Update how the context in which operations are called is determ…
PintoGideon Aug 23, 2024
f4363d1
feat: Update file previews for library table
PintoGideon Aug 23, 2024
1d20183
feat: Update the Library Table to show file previews correctly
PintoGideon Aug 23, 2024
1c6f838
feat: Cleanup
PintoGideon Aug 23, 2024
ab8228c
feat: merge
PintoGideon Aug 26, 2024
6805968
feat: Update to folder upload statuses
PintoGideon Aug 26, 2024
489e0a4
feat: Uploading a file or a folder in the feeds list page creates a n…
PintoGideon Aug 26, 2024
8df1862
feat: merge master
PintoGideon Aug 26, 2024
b507435
feat: merge with master
PintoGideon Aug 26, 2024
11204e8
refactor: Improve code readability in the cart component
PintoGideon Aug 26, 2024
4ca3a1d
refactor: cleanup
PintoGideon Aug 26, 2024
fdae3c6
feat: Update the Search Bar in the Feeds Table
PintoGideon Aug 27, 2024
88219ab
feat: Simple implementation of clearing out the notification panel
PintoGideon Aug 27, 2024
11ebb6c
feat: General Improvements
PintoGideon Aug 27, 2024
f62da16
feat: Redesign the Header Page for the ui
PintoGideon Aug 27, 2024
7ba53c9
feat: Update File and Folder Uploads
PintoGideon Aug 28, 2024
f65bb5a
feat: Update how titles are displayed in the ui
PintoGideon Aug 28, 2024
e13bd0e
refactors: Miscellanous improvements
PintoGideon Aug 28, 2024
0c1304a
feat: List view as the default in the Library Table
PintoGideon Aug 28, 2024
607e77a
refactor: Fix regression
PintoGideon Aug 28, 2024
f70bc7b
feat: Fix the title of the pages in light mode
PintoGideon Aug 28, 2024
812c345
feat: Update the library page to show highlights to newly created res…
PintoGideon Aug 28, 2024
c37b228
Add a tag to newly created resources in the library
PintoGideon Aug 29, 2024
65eb2b0
feat: Rewworking file and folder selections with checkboxes
PintoGideon Aug 29, 2024
c2c2405
feat: Use Helper Functions in the File Browser Table
PintoGideon Aug 29, 2024
53dca7d
feat: minor update to the context menu interaction
PintoGideon Aug 29, 2024
37bd360
feat: css updates to the data tables
PintoGideon Aug 29, 2024
9537c86
refactors: Minor Updates
PintoGideon Aug 29, 2024
4310e3a
feat: CSS improvements in the Library Table
PintoGideon Aug 29, 2024
c567000
feat: Fix Store Bug
PintoGideon Aug 29, 2024
bf24d1d
feat: Add spacing
PintoGideon Aug 29, 2024
955e5c6
feat: Update resource interactions based on the focus group
PintoGideon Aug 29, 2024
6fc1b5a
fix: Fix Folder Click
PintoGideon Aug 29, 2024
618d542
feat: Update the tables to use the patternfly select instead of Check…
PintoGideon Aug 29, 2024
6a8fde9
feat: Remove unused code
PintoGideon Aug 30, 2024
4cef9a9
feat: Update the Feed Table to use Patternfly's select elements for b…
PintoGideon Sep 3, 2024
d05bef5
feat: Update create feed with file uploads in the feed table
PintoGideon Sep 3, 2024
78e99c2
Merge branch 'Folders-Links-Revised' of https://github.com/FNNDSC/ChR…
PintoGideon Sep 4, 2024
d676e85
feat: Create Feed for file and folder uploads in the Feed Table
PintoGideon Sep 4, 2024
1ec04f0
feat: Rename a Feed
PintoGideon Sep 4, 2024
fb5dd40
feat: Do not allow empty values in the Operation Modal
PintoGideon Sep 4, 2024
1f9379d
feat: Disable rename for library and file browser table
PintoGideon Sep 5, 2024
57a333e
fix: Update the useOperations hook
PintoGideon Sep 5, 2024
c6f0d57
feat: Update the store saga with a fix
PintoGideon Sep 5, 2024
89c1b96
feat: Add a fixed width to the Newly Added Label to prevent layout sh…
PintoGideon Sep 5, 2024
0536e14
feat: Handle bad feed names in the Feed Table
PintoGideon Sep 5, 2024
2dd89f3
feat: Implement sorting in the Feeds List Table
PintoGideon Sep 5, 2024
e7f8df4
feat: Update the "CreateFeed" option in the Library Page
PintoGideon Sep 5, 2024
c45c1f4
feat: Use Inter as the default font
PintoGideon Sep 5, 2024
07d098c
feat: Update the Library Table to use feed names
PintoGideon Sep 6, 2024
e87c2ea
fix: Fix the sorting of feeds according to the sizes
PintoGideon Sep 6, 2024
e7b6339
fix: Fix the regression in status tracking while adding a node
PintoGideon Sep 6, 2024
2ac1241
fix: Fix quoting of strings in the terminal
PintoGideon Sep 6, 2024
06afcb3
feat: Disable the 'New Folder' menu item in the feeds table
PintoGideon Sep 6, 2024
5cb603f
feat: Resize the terminal dynamically
PintoGideon Sep 6, 2024
e41c6ad
fix: Update the Node Details Panel to reflect the feed author correctly
PintoGideon Sep 6, 2024
6f64fad
Update miniChRIS to CUBE version 6
jennydaman Sep 12, 2024
a93f3db
Disable end-to-end testing in GHA
jennydaman Sep 12, 2024
02c1927
Merge pull request #1243 from jennydaman/upgrade-minichris
jennydaman Sep 12, 2024
12d13fe
feat: Fix the owner_username field in the Library Table
PintoGideon Sep 12, 2024
86d54d3
chore: Update cornerstone
PintoGideon Sep 12, 2024
aec814f
fix: Continous polling in the feed table due to incorrect data handling
PintoGideon Sep 12, 2024
4af90d6
fix: Bug fix in the Library page
PintoGideon Sep 12, 2024
055464f
feat: Update how previews are loaded
PintoGideon Sep 12, 2024
24e3572
feat: Update how previews are fetched
PintoGideon Sep 13, 2024
997dc6b
feat: Implement stack scroll for dicom images
PintoGideon Sep 13, 2024
d0d7dd2
feat: Add dicom scrolling to the library table
PintoGideon Sep 13, 2024
f9754d4
refactor: General cleanup
PintoGideon Sep 13, 2024
5dc1248
Add LonkClient
jennydaman Sep 16, 2024
288aea3
Add new fp-ts PfdcmClient
jennydaman Sep 16, 2024
090efc6
feat: Implement the scroll feature in Dicom Display
PintoGideon Sep 16, 2024
827f252
feat: Updates to the dicom viewer
PintoGideon Sep 16, 2024
b5434b5
feat: Update the position of the image count
PintoGideon Sep 16, 2024
5d5b49f
feat: replace npm with pnpm
PintoGideon Sep 17, 2024
1a4ef7c
feat: Update .gitignore and remove .npmrc
PintoGideon Sep 17, 2024
6b01e80
feat: upgrade npm dependencies
PintoGideon Sep 17, 2024
06f1e13
update test.yml
PintoGideon Sep 17, 2024
faf6c26
feat: Update test.yml to work with pnpm
PintoGideon Sep 17, 2024
5bf9da3
feat: minor cleanup
PintoGideon Sep 17, 2024
f3848d3
feat: Cleanup outdated tests
PintoGideon Sep 17, 2024
86e791c
Begin rewriting Pacs
jennydaman Sep 16, 2024
5991eda
Fix font styling conflict by antd App component
jennydaman Sep 17, 2024
a847ebc
refactor: Refactor the code for TitleComponent
PintoGideon Sep 18, 2024
bb5b3fd
feat: Rename Files, Folders and Links
PintoGideon Sep 18, 2024
fb1e304
feat: Update data fetching and error handling in the Library Table
PintoGideon Sep 18, 2024
d44f387
feat: Update the renaming of files and folders in the card view
PintoGideon Sep 19, 2024
9221126
refactor: Cleanup
PintoGideon Sep 19, 2024
1eb25ba
feat: Update download saga to remove hard coded lookup for zip file
PintoGideon Sep 19, 2024
c375e6d
refactor: Cleanup code
PintoGideon Sep 19, 2024
d689af0
feat: Disallow folder uploads when the file upload option is selected
PintoGideon Sep 19, 2024
a79c046
refactor: Cleanup
PintoGideon Sep 19, 2024
bd7e31f
staging with tag
chhsiao1981 Sep 20, 2024
5e1e3d9
Merge pull request #1247 from chhsiao1981/staging-workflow
PintoGideon Sep 20, 2024
0419bb7
Change LonkClient to accept handlers via init
jennydaman Sep 21, 2024
77e8ea4
Merge branch 'staging' of github.com:FNNDSC/ChRIS_ui into staging
jennydaman Sep 21, 2024
f71c38c
Merge staging (switch from npm to pnpm)
jennydaman Sep 21, 2024
c0556a5
Migrate .../Pacs/components/input.tsx to antd
jennydaman Sep 21, 2024
f2570aa
Fix illegal syntax errors
jennydaman Sep 21, 2024
fd55d21
fmt
jennydaman Sep 21, 2024
c020771
Add lefthook.yml
jennydaman Sep 21, 2024
9f8078e
Merge pull request #1248 from jennydaman/fmt
PintoGideon Sep 21, 2024
d2074e2
Merge remote-tracking branch 'upstream/staging' into pacs-progress-we…
jennydaman Sep 21, 2024
707d10e
LonkClient.unsubscribeAll
jennydaman Sep 21, 2024
08e95e4
Remove rollup-plugin-node-builtins
jennydaman Sep 22, 2024
9ac4b35
Check VITE_OHIF_URL is not empty
jennydaman Sep 22, 2024
9c928d5
Build on metal, serve using static-web-server
jennydaman Sep 22, 2024
2b406a1
Add Ackee environment variable to production image
jennydaman Sep 22, 2024
16acae7
Add more comments
jennydaman Sep 22, 2024
7054639
Merge pull request #1249 from FNNDSC/docker
jennydaman Sep 22, 2024
0c5b27d
Merge staging #1249
jennydaman Sep 22, 2024
2a72864
Reorganize Pacs to be MVC-ish
jennydaman Sep 22, 2024
2ad8b55
Add helpers for testing components which use redux
jennydaman Sep 22, 2024
d6492a3
Refactor usage of useDispatch and useSelector
jennydaman Sep 22, 2024
aa53892
Merge pull request #1250 from jennydaman/useappdispatch
jennydaman Sep 22, 2024
238fb4e
Skip build if secret is missing
jennydaman Sep 22, 2024
94d0b3e
Merge branch 'staging' of github.com:FNNDSC/ChRIS_ui into staging
jennydaman Sep 22, 2024
75ed5fa
Merge staging #1250
jennydaman Sep 22, 2024
5e3fd36
Implement PACS query
jennydaman Sep 22, 2024
6bc5f3e
Implement PACS study details
jennydaman Sep 23, 2024
8628407
Replace Radio.Group with Segmented
jennydaman Sep 23, 2024
7c530d5
Change Pacs studies to use Collapse instead of List
jennydaman Sep 23, 2024
e2cdc0e
Add AccessionNumber to study title
jennydaman Sep 23, 2024
66a0f0b
SeriesList
jennydaman Sep 23, 2024
6bd00a7
Fix something I forgot in #1250
jennydaman Sep 23, 2024
eaaf932
Delete unused src/api/filesystem.ts
jennydaman Sep 23, 2024
a20b1d0
Merge remote-tracking branch 'upstream/staging' into pacs-progress-we…
jennydaman Sep 23, 2024
d5fd754
Merge pull request #1252 from jennydaman/remove-obsolete
PintoGideon Sep 23, 2024
5b3a2c4
Remove redux from Pacs code
jennydaman Sep 23, 2024
a46000d
fix: Update 'share' resources
PintoGideon Sep 23, 2024
cfc4e95
Merge branch 'staging' of https://github.com/FNNDSC/ChRIS_ui into sta…
PintoGideon Sep 23, 2024
c4a2b39
WIP
jennydaman Sep 24, 2024
5bb10d8
ReceiveState
jennydaman Sep 24, 2024
f3057a3
Fix pfdcm tests since removal of fp-ts monads
jennydaman Sep 24, 2024
02d7e39
useLonk
jennydaman Sep 24, 2024
1a66b2a
Rename things + more documentation
jennydaman Sep 24, 2024
6d39059
feat: update upload saga
PintoGideon Sep 24, 2024
23c0a4a
fix: Fix the pagination bug in the dicom scroll
PintoGideon Sep 24, 2024
09841fd
Merge branch 'Folders-Links-Revised' into staging
PintoGideon Sep 24, 2024
aebdaa4
Do not build if cannot login to Docker Hub
jennydaman Sep 25, 2024
fcdfcbe
Merge pull request #1255 from jennydaman/fix-build-from-outside
jennydaman Sep 25, 2024
27b4da4
Remove pnpm version from GHA
jennydaman Sep 25, 2024
e39a50a
Merge staging
jennydaman Sep 25, 2024
0811d4e
PACS pull is working, progress messages aren't though.
jennydaman Sep 25, 2024
76c5a75
Pull study works, except for the last part.
jennydaman Sep 25, 2024
684d06a
Allow /srv to be non-empty
jennydaman Sep 25, 2024
ea6d7f1
Merge branch 'staging' into pacs-progress-websockets
jennydaman Sep 25, 2024
6e75b2b
feat: Update dcm display for single frame and multiframe
PintoGideon Sep 25, 2024
60cbe9d
feat: Temp workout for dcm scroll bug
PintoGideon Sep 25, 2024
ad7fba4
Everything working! I think...
jennydaman Sep 26, 2024
a74ae25
Customize progress bar theme
jennydaman Sep 26, 2024
2df2851
Implement series pull
jennydaman Sep 26, 2024
e8ddeef
Fix crash on invalid StudyDate
jennydaman Sep 26, 2024
27db1fc
Add test stub
jennydaman Sep 26, 2024
1d0131c
feat: Improve lazy loading of files in cornerstone
PintoGideon Sep 26, 2024
5f99267
fix: Fix the bug in dicom scrolling
PintoGideon Sep 26, 2024
4f94174
feat: Update the pipeline page to read from the configured url
PintoGideon Sep 27, 2024
d3a0301
feat: Error Handling in the pipelines page
PintoGideon Sep 27, 2024
fa87189
feat: Tracking current frame indexes in the dicom scroll
PintoGideon Sep 28, 2024
0371b57
fix: Set the correct compute env for fs plugins in the create feed wi…
PintoGideon Sep 30, 2024
30daeed
feat: mvp for an updated store
PintoGideon Sep 30, 2024
bc76357
feat: Update the Store
PintoGideon Sep 30, 2024
9de4e08
Merge branch 'staging' of github.com:FNNDSC/ChRIS_ui into staging
jennydaman Sep 30, 2024
630a9c8
feat: Update biome.json to show react-hooks/exhaustive-deps
PintoGideon Oct 2, 2024
c2db78e
Update cube:6.3.0-beta.2
jennydaman Oct 2, 2024
436d87e
feat: Add a sticky header to the library page
PintoGideon Oct 2, 2024
74c905b
feat: Replace Patternfly Drawers with React Resizable Panels
PintoGideon Oct 2, 2024
815dc6e
feat: Fix the bug in minimizing and maximizing panels with react-resi…
PintoGideon Oct 3, 2024
a39fcd6
Merge branch 'staging' of https://github.com/FNNDSC/ChRIS_ui into sta…
PintoGideon Oct 3, 2024
7936223
feat: Adjust panel height for dicom images
PintoGideon Oct 3, 2024
a7afdce
feat: Sticky Headers and Responsive Tables
PintoGideon Oct 3, 2024
7d74ffa
refactor: General cleanup
PintoGideon Oct 3, 2024
f1d568d
feat: Fix dicom indicators in light mode
PintoGideon Oct 3, 2024
c3765d9
feat: Responsive layout for the feed detail view page
PintoGideon Oct 3, 2024
710157c
fix: Fix Dicom Display
PintoGideon Oct 3, 2024
3c380b5
feat: Add a success notification to the config form
PintoGideon Oct 4, 2024
6a4fe34
feat: Fix a regression in the Library Page
PintoGideon Oct 4, 2024
75b1eb5
feat: Fix dcm display for multi stack scroll
PintoGideon Oct 8, 2024
8c922cb
feat: cine player for a dicom display
PintoGideon Oct 8, 2024
5e1705e
fix: Fix the regression in the 3D rendering of the Feed Graph
PintoGideon Oct 8, 2024
aa2c3cb
feat: Cleanup
PintoGideon Oct 8, 2024
9e4a713
Merge remote-tracking branch 'upstream/staging' into pacs-progress-we…
jennydaman Oct 9, 2024
67339e9
feat: Update the Overview Page
PintoGideon Oct 9, 2024
39904af
fix: Fix Typo
PintoGideon Oct 9, 2024
884c1c0
feat: Update image display
PintoGideon Oct 9, 2024
a9165e4
refactor: cleanup
PintoGideon Oct 9, 2024
37f0839
Hacky workaround for double firing of pull request
jennydaman Oct 9, 2024
08e5280
Revert "Hacky workaround for double firing of pull request"
jennydaman Oct 10, 2024
ef2cc3a
Small changes
jennydaman Oct 10, 2024
e174158
pnpm run fmt
jennydaman Oct 10, 2024
8e169bc
Change type of pullRequests from ReadonlyArray to PullRequestStates
jennydaman Oct 10, 2024
f7cf25a
terribleStrictModeWorkaround
jennydaman Oct 10, 2024
5e8505e
Fix all lints
jennydaman Oct 10, 2024
11c4b2c
feat: Improve accessibility
PintoGideon Oct 10, 2024
43d9fd0
Fix some pypx types
jennydaman Oct 10, 2024
d0d2bd0
Automatically expand if only one study found
jennydaman Oct 10, 2024
8a8aedb
Fix infinite useEffects calling lonk.subscribe
jennydaman Oct 11, 2024
c0001cd
Add tests
jennydaman Oct 11, 2024
4ede58b
Delete example.test.ts
jennydaman Oct 11, 2024
2ca5227
Make CUBE_POLL_INTERVAL_MS configurable via environment variable
jennydaman Oct 11, 2024
909518c
feat: Cleaner and maintenable d3 tree
PintoGideon Oct 14, 2024
aa0f978
fix: Resize the terminal correctly
PintoGideon Oct 15, 2024
4da7d1b
feat: Sticky feed header
PintoGideon Oct 16, 2024
8047e61
feat: Update Deletion of Nodes
PintoGideon Oct 16, 2024
c7a3472
feat: Delete an active plugin instance and descendants
PintoGideon Oct 16, 2024
f2e5401
feat: Handle loading state in the filebrowser
PintoGideon Oct 17, 2024
b911366
Merge pull request #1258 from FNNDSC/pacs-progress-websockets
PintoGideon Oct 18, 2024
e8c47f9
Upgrade miniChRIS
jennydaman Oct 18, 2024
5be5601
feat: minor-cleanup
PintoGideon Oct 18, 2024
bc88456
feat: remove unused depedencies
PintoGideon Oct 18, 2024
a08d407
Merge branch 'staging' of github.com:FNNDSC/ChRIS_ui into staging
jennydaman Oct 19, 2024
ff0e107
Add side-effects-cache = false to .npmrc
jennydaman Oct 19, 2024
e2e079f
pnpm run fmt
jennydaman Oct 19, 2024
4af01fd
Merge pull request #1279 from jennydaman/fix-lefthook-install
jennydaman Oct 19, 2024
a433970
Increase oxidicom message throttling
jennydaman Oct 19, 2024
186ed60
Merge branch 'staging' of github.com:FNNDSC/ChRIS_ui into staging
jennydaman Oct 19, 2024
229ba91
Remove p-queue
jennydaman Oct 19, 2024
5041d79
Upgrade pnpm to 9.12.2
jennydaman Oct 21, 2024
7ab5001
Merge pull request #1280 from jennydaman/upgrade-pnpm
PintoGideon Oct 21, 2024
83765c1
refactor: Update the regression in tooling
PintoGideon Oct 22, 2024
b7e528d
feat: Update the placement of the play/pause control for the cine player
PintoGideon Oct 22, 2024
2ff7983
Merge branch 'staging' of https://github.com/FNNDSC/ChRIS_ui into sta…
PintoGideon Oct 22, 2024
8fec853
feat: Optimize Dicom Display
PintoGideon Oct 23, 2024
b321f61
Merge branch 'tooling-fix' into staging
PintoGideon Oct 23, 2024
4c860e6
feat: cleanup
PintoGideon Oct 24, 2024
cbee7f0
Fix pypx types (#1281)
jennydaman Oct 24, 2024
7457f65
feat: Update pipeline export
PintoGideon Oct 25, 2024
b185593
Merge branch 'staging' of https://github.com/FNNDSC/ChRIS_ui into sta…
PintoGideon Oct 25, 2024
e82e70e
feat: Fix loading state
PintoGideon Oct 25, 2024
44640c3
feat: debugging
PintoGideon Oct 25, 2024
3914af1
feat: Update Dcm Display for ultrasounds
PintoGideon Oct 25, 2024
fd5b1e9
feat: Use cine tools from cornerstone instead of custom implementation
PintoGideon Oct 25, 2024
e5dfd6f
feat: minor bug fix
PintoGideon Oct 25, 2024
1ba5094
feat: Add progress bar to dicom display
PintoGideon Oct 29, 2024
73e40f6
feat: Update the ui to show file upload progress indicators
PintoGideon Oct 30, 2024
d447c02
feat: Add the 'Install All' button to the Store Page
PintoGideon Nov 1, 2024
807990a
feat: Add filters to the store page
PintoGideon Nov 1, 2024
33edd28
feat: Add a loading spinner to Dcm Display
PintoGideon Nov 1, 2024
4ff0e74
fix: Filtering bug
PintoGideon Nov 1, 2024
68c6794
Add CITATION.cffwq
rudolphpienaar Nov 4, 2024
a6b6506
Update authors
rudolphpienaar Nov 4, 2024
dd045b3
feat: Update SignUp and SimpleLoginPage components to use updated use…
PintoGideon Nov 5, 2024
44a7e02
Merge branch 'staging' of https://github.com/FNNDSC/ChRIS_ui into sta…
PintoGideon Nov 5, 2024
36f2dcb
feat: Update Sign Up
PintoGideon Nov 8, 2024
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36 changes: 36 additions & 0 deletions CITATION.cff
Original file line number Diff line number Diff line change
@@ -0,0 +1,36 @@
cff-version: 1.2.0
message: If you use this software, please cite it as below.
title: ChRIS User Interface
version: 2.0.0
date-released: 2024-11-04
repository-code: https://github.com/FNNDSC/ChRIS_ui
license: MIT
type: software
authors:
- family-names: Pinto
given-names: Gideon
- family-names: Samal
given-names: Sandip
- family-names: Ruisel-Bernal
given-names: Jorge
- family-names: Zhang
given-names: Jennings
orcid: https://orcid.org/0000-0001-6473-3316
- family-names: Pienaar
given-names: Rudolph
orcid: https://orcid.org/0000-0002-8684-3185
keywords:
- ChRIS
- web-based user interface
- medical imaging
- DICOM
- PACS
abstract: |
ChRIS_ui is the reference user interface for the ChRIS project. This interface is a web-based
and communicates with the core underlying backend (CUBE) to provide a full and rich interface
experience, including an internal filesystem browser, many built-in image file type rendering
support, management of computational workflows, sharing of data and results, and much more.
references:
- type: software
title: "ChRIS Backend"
url: "https://github.com/FNNDSC/ChRIS_ultron_backEnd"