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@FZJ-INM1-BDA

Big Data Analytics group

Big Data Analytics group at the Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Juelich

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  1. celldetection celldetection Public

    Scalable Instance Segmentation using PyTorch & PyTorch Lightning.

    Python 133 21

  2. siibra-python siibra-python Public

    Software interfaces for interacting with brain atlases - Python client

    Python 51 11

  3. siibra-explorer siibra-explorer Public

    TypeScript 23 5

  4. pytiff pytiff Public

    Cython 11 13

  5. siibra-tutorials siibra-tutorials Public

    Tutorials for the siibra toolsuite - software interface for brain atlases.

    Jupyter Notebook 10 1

  6. neurips22-cell-seg neurips22-cell-seg Public

    Python 7 1

Repositories

Showing 10 of 37 repositories
  • celldetection Public

    Scalable Instance Segmentation using PyTorch & PyTorch Lightning.

    FZJ-INM1-BDA/celldetection’s past year of commit activity
    Python 133 Apache-2.0 21 14 0 Updated Apr 22, 2025
  • iav-dep-test Public
    FZJ-INM1-BDA/iav-dep-test’s past year of commit activity
    Python 0 0 0 0 Updated Apr 16, 2025
  • siibra-python Public

    Software interfaces for interacting with brain atlases - Python client

    FZJ-INM1-BDA/siibra-python’s past year of commit activity
    Python 51 Apache-2.0 11 44 8 Updated Apr 13, 2025
  • siibra-explorer Public
    FZJ-INM1-BDA/siibra-explorer’s past year of commit activity
    TypeScript 23 Apache-2.0 5 54 7 Updated Apr 11, 2025
  • siibra-tutorials Public

    Tutorials for the siibra toolsuite - software interface for brain atlases.

    FZJ-INM1-BDA/siibra-tutorials’s past year of commit activity
    Jupyter Notebook 10 Apache-2.0 1 1 0 Updated Apr 11, 2025
  • siibra-api Public
    FZJ-INM1-BDA/siibra-api’s past year of commit activity
    Python 4 Apache-2.0 3 5 0 Updated Apr 11, 2025
  • siibra-configurations Public
    FZJ-INM1-BDA/siibra-configurations’s past year of commit activity
    Python 1 2 24 5 Updated Apr 10, 2025
  • siibra-jugex Public

    Differential analysis of gene expressions in human brain regions

    FZJ-INM1-BDA/siibra-jugex’s past year of commit activity
    Python 0 Apache-2.0 1 2 2 Updated Apr 2, 2025
  • voluba Public

    Browser based tool for interactive alignment of high-resolution volumes of interest to 3D reference brain models

    FZJ-INM1-BDA/voluba’s past year of commit activity
    Vue 4 Apache-2.0 0 31 3 Updated Apr 2, 2025
  • HBP-connectivity-component Public
    FZJ-INM1-BDA/HBP-connectivity-component’s past year of commit activity
    TypeScript 1 MIT 0 3 1 Updated Mar 31, 2025
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