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@GallowayLabMIT

Galloway Lab

Connecting basic research questions in gene circuits, genome architecture, and cell fate transitions to tool development for biomedical applications.

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  1. zstacker zstacker Public

    Utility function to convert z-stack of images into an OpenVDB file format

    C++ 3 2

  2. tangles_model tangles_model Public

    Code for simulating user-defined gene circuits under the influence of supercoiling-mediated feedback

    Jupyter Notebook 1

  3. protocols protocols Public

    Collected GallowayLab protocols

    Python

  4. labbot labbot Public

    Python

  5. cds_review_figures cds_review_figures Public

    Nuclear architecture figures

  6. ORCA-public ORCA-public Public

    Forked from BoettigerLab/ORCA-public

    Fork of the Boettiger lab ORCA code

    MATLAB

Repositories

Showing 10 of 17 repositories
  • plasmids Public
    GallowayLabMIT/plasmids’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 24, 2025
  • protocols Public

    Collected GallowayLab protocols

    GallowayLabMIT/protocols’s past year of commit activity
    Python 0 0 20 0 Updated Feb 21, 2025
  • ComMAND Public
    GallowayLabMIT/ComMAND’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 15, 2025
  • article-engraftable-neurons Public
    GallowayLabMIT/article-engraftable-neurons’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 11, 2025
  • article-prolif-TF-levels Public

    Code and data for proliferation history and TF levels drive direct conversion to motor neurons

    GallowayLabMIT/article-prolif-TF-levels’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 11, 2025
  • rushd Public

    Package for maintaining robust, reproducible data management

    GallowayLabMIT/rushd’s past year of commit activity
    Python 0 MIT 0 13 0 Updated Feb 1, 2025
  • idr Public Forked from kundajelab/idr

    IDR

    GallowayLabMIT/idr’s past year of commit activity
    Python 0 GPL-2.0 46 0 0 Updated Oct 10, 2024
  • labbot Public
    GallowayLabMIT/labbot’s past year of commit activity
    Python 0 MIT 0 7 1 Updated Aug 28, 2023
  • snakepipes Public Forked from maxplanck-ie/snakepipes

    Customizable workflows based on snakemake and python for the analysis of NGS data

    GallowayLabMIT/snakepipes’s past year of commit activity
    Python 0 MIT 86 0 0 Updated Jun 12, 2023
  • cold_backups Public
    GallowayLabMIT/cold_backups’s past year of commit activity
    Python 0 0 0 0 Updated Jan 31, 2023
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