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v1.9.0
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@adkinsrs adkinsrs released this 13 Feb 16:19
· 5 commits to master since this release
v1.9.0
8dc6f0e

Full Changelog: v1.8.3...v1.9.0

  • FEATURE - Adding --no_output_header option to not print the header line in output. Useful for when you want to pipe this output to another tool.
  • FEATURE - Adding --exclude_regions option to exclude any regions found in a passed-in BED file.
  • FEATURE - Adding --log_file and --log_level options to display or hide log messages of varying severity. Note that currently --log_level=DEBUG will print the line number, as I haven't figured out how to disable that for debug-level messages yet.
  • Optimized some pieces of code for speed (thanks Github Copilot). This should increase the speed where a GFF feature has 100,000s of overlaps with the BAM alignments
  • Updating package versions and Julia version
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