GitHub - JasonR055/Bisulfite_tools: Pipeline for alignment of Illumina bisulfite sequencing data and associated tools

Name		Name	Last commit message	Last commit date
Latest commit History 37 Commits
.gitignore		.gitignore
Bisulfite_stats.sh		Bisulfite_stats.sh
CpG_bias.R		CpG_bias.R
CpG_preparation.R		CpG_preparation.R
align_PE.sh		align_PE.sh
align_SE.sh		align_SE.sh
align_lane_PE.sh		align_lane_PE.sh
align_lane_SE.sh		align_lane_SE.sh
bedGraph_to_Rdata.R		bedGraph_to_Rdata.R
calculate_depth.R		calculate_depth.R
fragment_size.sh		fragment_size.sh
prep_reads.sh		prep_reads.sh
prepare_genome.sh		prepare_genome.sh
process_lane.sh		process_lane.sh
summarise_lane.sh		summarise_lane.sh