batch file

run_docker_image.bat

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+echo '[1] Running the whole pipeline in testing mode...'
+
+echo '[2] Kindly make sure that you meet the folder structure arrangement given in readme.md ...'
+
+echo '[3] Path to the raw pet and ground truth (gt)  folders, e.ge. E:/data/ Where the data
+        is the main path directory to all cases'
+set input_dir=%1
+
+echo '[4] Path to the output folders, e.ge. E:/output/ where the all results should be saved'
+set output_dir=%2
+
+echo '[5] Unique docker image name (Name used during building):, e.g., ai4elife:v1, put ai4elife '
+set docker_image_name=%3
+
+echo '[6] Unique docker tage (Name used during building) otherwise latest will be downloaded:, e.g., ai4elife:v1, give v1'
+set docker_tag=%4
+
+echo '[7] Unique container id (any name): '
+set CONTAINERID=%5
+
+echo '[8] Running the docker with container id: %CONTAINERID% ....'
+
+docker run -it --rm --name %CONTAINERID%^
+    -v %input_dir%:/input_data ^
+    -v %output_dir%:/output ^
+    %docker_image_name%:%docker_tag% ^
+