A curated collection of bioinformatics tools to get started with sequence analysis, gene annotations, phylogenetics and protein structure prediction.
Some parts of these scripts were generated or refined with the help of AI tools (e.g., ChatGPT), and were subsequently tested, adapted, and applied in real research contexts.
This repository reflects my learning journey as a bioinformatician and serves as a portfolio of my progress throughout my academic and professional development.
The data used with these scripts is part of ongoing research and is not publicly available due to confidentiality.
To run the scripts, you will need your own input files in the appropriate format (FASTA and BLAST XML).
File names used in the scripts are placeholders and should be replaced with your own data.
This project is licensed under the MIT License – see the LICENSE file for details.
If you use this code in your research, please cite the repository:
Luiza Lima Galli. Bioinformatics Tools for Learning and Research. GitHub, 2025. https://github.com/LLG00/bioinfo-scripts
Or acknowledge in your work:
“Tools collected from Luiza Lima Galli's bioinformatics repository on GitHub.”
This is not required, but very appreciated.