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Help says to use 'species' column not 'Species_expected'

Documentation

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#186 In MDU-PHL/bohra;

· tseemann opened on Mar 7, 2026

Can these options be removed?

enhancementNew feature or requestNew feature or request

old_V2Legacy version 2.x problem.Legacy version 2.x problem.

Status: Open.

#185 In MDU-PHL/bohra;

· tseemann opened on Mar 7, 2026

How do i set the min contig length ?

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#184 In MDU-PHL/bohra;

· tseemann opened on Mar 7, 2026

How do I re-run a particular assay?

enhancementNew feature or requestNew feature or request

fix pending

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#183 In MDU-PHL/bohra;

· tseemann opened on Mar 7, 2026

Explaing how "Species_expected" works

Documentation

Status: Open.

Task

#182 In MDU-PHL/bohra;

· tseemann opened on Mar 6, 2026

Ensure that EC-typer database was downloaded

bugSomething isn't workingSomething isn't working

URGENTPlease fix ASAPPlease fix ASAP

Status: Open.

Bug

#181 In MDU-PHL/bohra;

· tseemann opened on Mar 6, 2026

deps check is not chdcking for Mob-Suite database

bugSomething isn't workingSomething isn't working

URGENTPlease fix ASAPPlease fix ASAP

Status: Open.

Bug

#180 In MDU-PHL/bohra;

· tseemann opened on Mar 6, 2026

Add staphtyper

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#175 In MDU-PHL/bohra;

· tseemann opened on Feb 28, 2026

Can't reinstall a brken, exisiting env

bugSomething isn't workingSomething isn't working

Status: Open.

#172 In MDU-PHL/bohra;

· tseemann opened on Feb 24, 2026

Add "bohra deps upgrade"

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#171 In MDU-PHL/bohra;

· tseemann opened on Feb 24, 2026

Add touch file to know a dep install completed

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#170 In MDU-PHL/bohra;

· tseemann opened on Feb 24, 2026

Add phnylonum compataotr

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#166 In MDU-PHL/bohra;

· tseemann opened on Feb 14, 2026