Circuit Level optimizations

The following code attempts to calculate the cost of various circuit-level optimizations that can be applied to Shor's algorithm. Similar to the work done in [GE21] and [GS23]. Will be using the new adder from[Fed25].

Directory Overview:

C:.
│   LICENSE
│   README.md
│
├───circuits
│   ├───2025
│   │   │   clean.py
│   │   │   compare.py
│   │   │   errorrates(1).csv
│   │   │   errorrates(2).csv
│   │   │   errorratevariation(1).csv
│   │   │   errorratevariation.csv
│   │   │   error_correction.py
│   │   │   estimate.py
│   │   │   estimateoldadder.csv
│   │   │   estimates.csv
│   │   │   estimates1.csv
│   │   │   estimatesupdatednewadder.csv
│   │   │   extraoplate.py
│   │   │   gid+ekera(more).csv
│   │   │   gid+ekera.csv
│   │   │   gou.csv
│   │   │   latexgen.py
│   │   │   openingdata1e3.csv
│   │   │   openingdata1e3wrunway(1).csv
│   │   │   openingdata1e3wrunway.csv
│   │   │   openingdata1e6.csv
│   │   │   params.csv
│   │   │   structures.py
│   │   │   structurespt2.py
│   │   │   tests.py
│   │   │
│   │   └───__pycache__
│   │           clean.cpython-310.pyc
│   │           error_correction.cpython-310.pyc
│   │           structures.cpython-310.pyc
│   │
│   ├───GE2021
│   │   │   estimate_costs.py
│   │   │   estimate_costs_test.py
│   │   │   fill-in-table.py
│   │   │   plot_costs.py
│   │   │   struct.py
│   │   │
│   │   └───__pycache__
│   │           struct.cpython-310.pyc
│   │
│   └───GS21
│       │   cout_shor.py
│       │   error_correction.py
│       │   tools.py
│       │
│       └───__pycache__
│               error_correction.cpython-310.pyc
│               tools.cpython-310.pyc
│
└───graphs
        compare.py
        errorratersa.png
        Figure_2.png
        Figure_3.png
        Figure_4.png
        gammaglm1.png
        glmplotwreg.png
        hoursforeach.png
        qubitsforeach.png
        rsadaysloglogstage3.png
        rsaqubitsloglogstage3.png
        rsavolumeloglog.png
        rsavolumeloglogscaleex.png
        rsavolumeloglogstage1.png
        rsavolumeloglogstage2.png
        rsavolumeloglogstage3.png
        rsavolumenologscaleex.png
        rsavolumexlogscaleex.png
        shorvsgnfs.png
        shorvsgnfs2.png

Introductory papers:

1. [VBE96]
2. [CDKP-M03]
3. [Dra00]
4. [Bea03]
5. [Gid18]
6. [Gid19]
7. [Zal06]

VERY HELPFUL for surface codes

1. [FMC12]

Currently reading:

1. [Gid19]
2. [Zal98]