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Updates MaBoSS, adds Microsoft Vistual Studio Compiler support, activates PhysiBoSS tests #403

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Updates MaBoSS, adds Microsoft Vistual Studio Compiler support, activates PhysiBoSS tests #403

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ce727e8
Updated MaBoSS version
vincent-noel Dec 19, 2025
3dd843e
Detecting MSVC and downloading a specific version of libmaboss
vincent-noel Dec 19, 2025
865f25b
Updating include to reflect the new directory structure
vincent-noel Dec 19, 2025
899d593
Activating physiboss on msvc workflows
vincent-noel Dec 19, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/build_binaries_cmake.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ jobs:
- os: windows-latest
c_compiler: cl
cpp_compiler: cl
build_physiboss: "OFF"
build_physiboss: "ON"
- os: ubuntu-latest
c_compiler: gcc
cpp_compiler: g++
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2 changes: 1 addition & 1 deletion .github/workflows/tests_cmake.yml
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Expand Up @@ -36,7 +36,7 @@ jobs:
{"use_physiboss": false, cwd: "build/sample_projects/episode", name: "PhysiCell Episode", binary: "episode", max_time: 120, config: "config/PhysiCell_settings.xml", validation_output_folder: ""},
]
platform: [
{"os": "windows-latest", "c_compiler": "cl", "cpp_compiler": "cl", "build_physiboss": "OFF"},
{"os": "windows-latest", "c_compiler": "cl", "cpp_compiler": "cl", "build_physiboss": "ON"},
{"os": "ubuntu-latest", "c_compiler": "gcc", "cpp_compiler": "g++", "build_physiboss": "ON"},
{"os": "ubuntu-latest", "c_compiler": "clang", "cpp_compiler": "clang++", "build_physiboss": "ON"},
{"os": "macos-latest", "c_compiler": "gcc-15", "cpp_compiler": "g++-15", "build_physiboss": "ON"},
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8 changes: 6 additions & 2 deletions addons/PhysiBoSS/CMakeLists.txt
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
set(MABOSS_VERSION v2.5.6)
set(MABOSS_VERSION v2.6.5.3)

function(create_physiboss_target MAX_NODES)
set(TARGET_NAME PhysiBoSS_${MAX_NODES}n)
Expand All @@ -25,7 +25,11 @@ function(create_physiboss_target MAX_NODES)
STREQUAL "arm64")
set(MABOSS_ARCHIVE libMaBoSS-macos-arm64.tar.gz)
elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows")
set(MABOSS_ARCHIVE libMaBoSS-win64.tar.gz)
if (MSVC)
set(MABOSS_ARCHIVE libMaBoSS-win64-msvc.tar.gz)
else()
set(MABOSS_ARCHIVE libMaBoSS-win64.tar.gz)
endif()
else()
message(FATAL_ERROR "Unsupported OS: ${CMAKE_SYSTEM_NAME}")
endif()
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2 changes: 1 addition & 1 deletion addons/PhysiBoSS/setup_libmaboss.py
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Expand Up @@ -20,7 +20,7 @@
# Assume Windows
mb_file = ""
url = ""
maboss_version = "v2.5.6"
maboss_version = "v2.6.5.3"
if os_type.lower() == 'darwin':
if "ARM64" in platform.uname().version:
mb_file = "libMaBoSS-macos-arm64.tar.gz"
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4 changes: 1 addition & 3 deletions addons/PhysiBoSS/src/maboss_network.h
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@@ -1,9 +1,7 @@
#ifndef _MaBoSS_Net_h_
#define _MaBoSS_Net_h_

#include "StochasticSimulationEngine.h"
#include "BooleanNetwork.h"
#include "RunConfig.h"
#include "engines/StochasticSimulationEngine.h"
#include "../../../core/PhysiCell_utilities.h"

/**
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