Updating High Resolution Tests, Fixing Minor Wave Issues

[JessicaMeixner-NOAA]

Description

This PR updates the wave fix which was unintentionally left out of PR #3190
Additionally, this updates what ICs the highres ci tests are pointing to (IC update issues: #3287 #3288)

-- Fixes #3260

Additionally, some smaller bug fixes and changes were made:

• Removes logic that tries to copy files to fix directory in ush/wave_grid_interp_sbs.sh
  -- Fixes logic issue in ush/wave_grid_interp_sbs.sh #3162
• Adds MPI variables that were found needed when investigating the HR4 hang HRv4 hangs on orion and hercules ufs-community/ufs-weather-model#2486
  -- Fixes Add MPI environment variables for orion/hercules #3259
• Changes the log file output directory corresponding to an update requested by NCO in v16.3.22 in scripts/exgfs_wave_post_pnt.sh
• Through debugging HR5 (Include fixes from bugs found when launching HR5 #3260) it was noticed the wave ICs were not used. While there is a code change required (Add reading of binary restart with PIO for runtype=initial  WW3#1359), this PR fixes the scripting level issues.
• Removes COMOUT_WAVE_PREP from wave post job that did not need it, plus ensured temporary files were not copied back to COM and then over-written (NCO bug)
  --- Fixes [NCO Bug] Wave post should not copy files to COM whose names might collide #297

Type of change

• Bug fix (fixes something broken)
• New feature (adds functionality)
• Maintenance (code refactor, clean-up, new CI test, etc.)

Change characteristics

• Is this a breaking change (a change in existing functionality)? NO
• Does this change require a documentation update? NO
• Does this change require an update to any of the following submodules? NO

While the full fix for the wave IC issue does require code changes, these changes are still needed and can be included before the WW3 update is there.

How has this been tested?

• Ran a C48 S2SW with the WW3 code update: /scratch1/NCEPDEV/climate/Jessica.Meixner/UpdateFixandHiresIC/c48t05 (Also earlier ran ci/cases/hires/C768_S2SW.yaml which ran out of time in the forecast but otherwise was succeeding: /scratch1/NCEPDEV/climate/Jessica.Meixner/UpdateFixandHiresIC/c768t01 )
• hires/C768_S2SW.yaml on orion is in progress: /work2/noaa/marine/jmeixner/UpdateFixandHiresIC/t01c768
• hires/C1152_S2SW.yaml on hercules is in progress: /work2/noaa/marine/jmeixner/hercules/UpdateFixandHiresIC/t01c1152

Checklist

• Any dependent changes have been merged and published
• My code follows the style guidelines of this project
• I have performed a self-review of my own code
• I have commented my code, particularly in hard-to-understand areas
• I have documented my code, including function, input, and output descriptions
• My changes generate no new warnings
• New and existing tests pass with my changes
• This change is covered by an existing CI test or a new one has been added
• Any new scripts have been added to the .github/CODEOWNERS file with owners
• I have made corresponding changes to the system documentation if necessary