Removed the plotting of nests - this is done offline now

ush/nwps_posproc_cgn_parallel.sh

@@ -324,68 +324,60 @@ echo " " | tee -a $logrunup
 
 # NOTE: If WEB is enable we must set PLOT to YES
 if [ "${WEB}" == "YES" ]; then export PLOT="YES"; fi
+# NOTE: Deactivating plotting of nests. This now done outside of the operational run 
+export PLOTNEST="NO"
 
 # NOTE: This will allow us to automate plotting with out send to Web option
 # NOTE: To save time, deactivate plotting when running retrospectives
-if [ "${PLOT}" == "YES" ] && [ "${RETROSPECTIVE}" == "FALSE" ]
+if [ "${PLOTNEST}" == "YES" ] && [ "${RETROSPECTIVE}" == "FALSE" ]
 then
   echo "RUN PYTHON PLOTTING SCRIPTS"
 
-  if [ "${siteid}" == "alu" ] || [ "${siteid}" == "aer" ] || [ "${siteid}" == "ajk" ]
+  TEMPDIR=${VARdir}/${siteid}.tmp/CG${CGNUM}
+  mkdir -p ${TEMPDIR}
+  GRAPHICSdir="${OUTPUTdir}/figures/${siteid}/CG${CGNUM}"
+  mkdir -p ${GRAPHICSdir}
+
+  echo "Creating output plots"
+  ${NWPSdir}/ush/python/plot_nwps_run.sh ${SITEID}
+  export err=$?; err_chk 
+
+  cycleout=$(awk '{print $1;}' ${RUNdir}/CYCLE)
+  COMOUTCYC="${COMOUT}/${cycleout}/CG${CGNUM}"
+  mkdir -p $COMOUTCYC
+
+  inputparm="${RUNdir}/inputCG${CGNUM}"
+  if [ ! -e ${inputparm} ]
   then
-#    echo "Cleaning Previous grads plots from ${OUTPUTdir}/grads/${siteid}" | tee -a $logfile
-#    rm -fr ${OUTPUTdir}/ush/grads/${siteid}/CG* | tee -a $logfile
-#    rm -fr ${OUTPUTdir}/ush/grads/${siteid}/partition | tee -a $logfile
-
-    TEMPDIR=${VARdir}/${siteid}.tmp/CG${CGNUM}
-    mkdir -p ${TEMPDIR}
-    GRAPHICSdir="${OUTPUTdir}/figures/${siteid}/CG${CGNUM}"
-    mkdir -p ${GRAPHICSdir}
-
-    echo "Creating output plots"
-    #${NWPSdir}/ush/grads/bin/plot_nwps_run.sh ${SITEID} |tee -a $logfile
-    ${NWPSdir}/ush/python/plot_nwps_run.sh ${SITEID}
-    export err=$?; err_chk 
-
-    cycleout=$(awk '{print $1;}' ${RUNdir}/CYCLE)
-    COMOUTCYC="${COMOUT}/${cycleout}/CG${CGNUM}"
-    mkdir -p $COMOUTCYC
-
-    inputparm="${RUNdir}/inputCG${CGNUM}"
-    if [ ! -e ${inputparm} ]
-    then
-       echo "ERROR - Missing inputCG${CGNUM} file"
-       echo "ERROR - Cannot open ${inputparm}"
-       export err=1; err_chk
-    fi
-    #Copying all needed data; input and programs here to run ru_runup.sh
-    # in ${VARdir}/${siteid}.tmp/CG${CGNUM}/runup
-    cp ${inputparm} .
-    grep "^INPGRID WIND" inputCG${CGNUM} > blah1
-    init=$(awk '{print $11;}' blah1)
-    echo "$init" > datetime
-    cut -c 1-4 datetime > year
-    cut -c 5-6 datetime > mon
-    cut -c 7-8 datetime > day
-    cut -c 10-11 datetime > hh
-    cut -c 12-13 datetime > mm
-
-    yyyy=$(cat year)
-    mon=$(cat mon)
-    dd=$(cat day)
-    hh=$(cat hh)
-    mm=$(cat mm)
-
-    # Copying field plots to COMOUT
-    echo "Copying PNG images to ${GRAPHICSdir}"
-    rm ${TEMPDIR}/*logo* ${TEMPDIR}/*Logo*
-    cp -vpf ${TEMPDIR}/*.png ${GRAPHICSdir}/.
-    chmod 777 ${GRAPHICSdir}/*.png
-    cd ${GRAPHICSdir}
-    figsTarFile="plots_CG${CGNUM}_${yyyy}${mon}${dd}${hh}.tar.gz"
-    tar cvfz ${figsTarFile} *.png
-    cp ${figsTarFile} $COMOUTCYC/${figsTarFile}
+     echo "ERROR - Missing inputCG${CGNUM} file"
+     echo "ERROR - Cannot open ${inputparm}"
+     export err=1; err_chk
   fi
+  cp ${inputparm} .
+  grep "^INPGRID WIND" inputCG${CGNUM} > blah1
+  init=$(awk '{print $11;}' blah1)
+  echo "$init" > datetime
+  cut -c 1-4 datetime > year
+  cut -c 5-6 datetime > mon
+  cut -c 7-8 datetime > day
+  cut -c 10-11 datetime > hh
+  cut -c 12-13 datetime > mm
+
+  yyyy=$(cat year)
+  mon=$(cat mon)
+  dd=$(cat day)
+  hh=$(cat hh)
+  mm=$(cat mm)
+
+  # Copying field plots to COMOUT
+  echo "Copying PNG images to ${GRAPHICSdir}"
+  rm ${TEMPDIR}/*logo* ${TEMPDIR}/*Logo*
+  cp -vpf ${TEMPDIR}/*.png ${GRAPHICSdir}/.
+  chmod 777 ${GRAPHICSdir}/*.png
+  cd ${GRAPHICSdir}
+  figsTarFile="plots_CG${CGNUM}_${yyyy}${mon}${dd}${hh}.tar.gz"
+  tar cvfz ${figsTarFile} *.png
+  cp ${figsTarFile} $COMOUTCYC/${figsTarFile}
 fi
 
 #Sending grib2 files with gridded wave parameters to COMOUT