NatLabRockies · ppinchuk · Apr 22, 2026 · Apr 21, 2026 · Apr 21, 2026 · Apr 21, 2026
diff --git a/.github/workflows/codecov.yml b/.github/workflows/codecov.yml
@@ -20,7 +20,7 @@ jobs:
         fetch-tags: true
         persist-credentials: false
     - name: Setup Python
-      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405
+      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: 3.13
     - name: Install dependencies
@@ -32,7 +32,7 @@ jobs:
       run: |
         pytest -v --cov=gaps --cov-report=html --cov-branch --cov-report=xml:coverage.xml --cov-fail-under=95
     - name: Upload coverage to Codecov
-      uses: codecov/codecov-action@57e3a136b779b570ffcdbf80b3bdc90e7fab3de2
+      uses: codecov/codecov-action@57e3a136b779b570ffcdbf80b3bdc90e7fab3de2 # v6.0.0
       with:
         token: ${{ secrets.CODECOV_TOKEN }}
         files: ./coverage.xml

diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
@@ -21,7 +21,7 @@ jobs:
           fetch-tags: true
           persist-credentials: false
 
-      - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0
+      - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5
         with:
           pixi-version: v0.62.2
           locked: true
@@ -35,7 +35,7 @@ jobs:
           pixi run -e dev python-docs
 
       - name: deploy
-        uses: peaceiris/actions-gh-pages@4f9cc6602d3f66b9c108549d475ec49e8ef4d45e
+        uses: peaceiris/actions-gh-pages@4f9cc6602d3f66b9c108549d475ec49e8ef4d45e # v4.0.0
         if: startsWith(github.ref, 'refs/tags/v')
         with:
           github_token: ${{ secrets.GITHUB_TOKEN }}

diff --git a/.github/workflows/linter.yml b/.github/workflows/linter.yml
@@ -19,12 +19,12 @@ jobs:
           fetch-depth: 0
           fetch-tags: true
           persist-credentials: false
-      - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6
+      - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 # v3.6.1
         with:
           version: "latest"
           args: check
           src: "./gaps"
-      - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6
+      - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 # v3.6.1
         with:
           version: "latest"
           args: format --check

diff --git a/.github/workflows/pixi_tests.yml b/.github/workflows/pixi_tests.yml
@@ -25,7 +25,7 @@ jobs:
         fetch-tags: true
         persist-credentials: false
 
-    - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0
+    - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5
       with:
         pixi-version: v0.62.2
         locked: true

diff --git a/.github/workflows/pr_rev_cli_tests.yml b/.github/workflows/pr_rev_cli_tests.yml
@@ -25,7 +25,7 @@ jobs:
         fetch-tags: true
         persist-credentials: false
     - name: Set up Python
-      uses: conda-incubator/setup-miniconda@fc2d68f6413eb2d87b895e92f8584b5b94a10167
+      uses: conda-incubator/setup-miniconda@fc2d68f6413eb2d87b895e92f8584b5b94a10167 # v3.3.0
       with:
         auto-update-conda: true
         python-version: 3.13

diff --git a/.github/workflows/publish_to_pypi.yml b/.github/workflows/publish_to_pypi.yml
@@ -22,7 +22,7 @@ jobs:
         fetch-tags: true
         persist-credentials: false
 
-    - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0
+    - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5
       with:
         pixi-version: v0.62.2
         locked: true
@@ -34,4 +34,4 @@ jobs:
       run: pixi run -e dev build-wheels
 
     - name: Publish package distributions to PyPI
-      uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e
+      uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e # v1.13.0
diff --git a/.github/workflows/release_drafter.yml b/.github/workflows/release_drafter.yml
@@ -12,6 +12,6 @@ jobs:
       pull-requests: write
     steps:
       - name: Release Drafter
-        uses: release-drafter/release-drafter@5de93583980a40bd78603b6dfdcda5b4df377b32
+        uses: release-drafter/release-drafter@5de93583980a40bd78603b6dfdcda5b4df377b32 # v7.2.0
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
diff --git a/.github/workflows/super_linter.yml b/.github/workflows/super_linter.yml
@@ -29,7 +29,7 @@ jobs:
             persist-credentials: false
 
       - name: Lint Code Base
-        uses: super-linter/super-linter/slim@61abc07d755095a68f4987d1c2c3d1d64408f1f9
+        uses: super-linter/super-linter/slim@61abc07d755095a68f4987d1c2c3d1d64408f1f9 # v8.5.0
         env:
           VALIDATE_ALL_CODEBASE: false
           VALIDATE_BIOME_LINT: false

diff --git a/.github/workflows/tests_tox.yml b/.github/workflows/tests_tox.yml
@@ -28,7 +28,7 @@ jobs:
         persist-credentials: false
 
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405
+      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: ${{ matrix.python-version }}
         cache: 'pip'
@@ -39,7 +39,7 @@ jobs:
         python -m pip install tox tox-gh-actions>=2.0
 
     - name: Load tox cache
-      uses: actions/cache/restore@27d5ce7f107fe9357f9df03efb73ab90386fccae
+      uses: actions/cache/restore@27d5ce7f107fe9357f9df03efb73ab90386fccae # v5.0.5
       with:
         path: .tox/
         key: ${{ runner.os }}-${{ matrix.python-version }}-tox-v1-${{ hashFiles('**/pyproject.toml') }}
@@ -53,7 +53,7 @@ jobs:
 
     - name: Save tox cache only on main
       if: github.ref == 'refs/heads/main'
-      uses: actions/cache/save@27d5ce7f107fe9357f9df03efb73ab90386fccae
+      uses: actions/cache/save@27d5ce7f107fe9357f9df03efb73ab90386fccae # v5.0.5
       with:
         path: .tox/
         key: ${{ runner.os }}-${{ matrix.python-version }}-tox-v1-${{ hashFiles('**/pyproject.toml') }}
@@ -77,7 +77,7 @@ jobs:
         persist-credentials: false
 
     - name: Set up Python 3.9
-      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405
+      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: 3.9
 

diff --git a/.github/workflows/wildows_pytests.yml b/.github/workflows/wildows_pytests.yml
@@ -20,7 +20,7 @@ jobs:
         fetch-tags: true
         persist-credentials: false
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405
+      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install Dependencies

diff --git a/docs/source/conf.py b/docs/source/conf.py
@@ -18,7 +18,6 @@
 import os
 import sys
 
-sys.path.insert(0, os.path.abspath("."))
 sys.path.insert(0, os.path.abspath("../../"))
 
 # -- Project information -----------------------------------------------------

diff --git a/docs/source/pkg_resources.py b/docs/source/pkg_resources.py