v2.5 GUI: MSFragger + Peptide/ProteinProphet + Reports
Use with Philosopher RC8+.
- ANSI Colors in console output recognized
- Philosopher init and clean commands replaced with workspace command
- Updates for the new version of TPP in Philosopher
- Separate Report/Filter defaults for all the tools.
- Buttons on Config page reset defaults for all tools.
- Each page can also be reset separately.