docs: audit-driven URL fixes (workspace phase)

CITATIONS.md

@@ -1,9 +1,9 @@
 # Citations & References
 
 The bibtex entries for **PyAutoGalaxy** and its affiliated software packages can be found
-[here](https://github.com/Jammy2211/PyAutoGalaxy/blob/main/files/citations.bib), with example text for citing **PyAutoGalaxy**
-in [.tex format here](https://github.com/Jammy2211/PyAutoGalaxy/blob/main/files/citations.tex) format here and
-[.md format here](https://github.com/Jammy2211/PyAutoGalaxy/blob/main/files/citations.md).
+[here](https://github.com/PyAutoLabs/PyAutoGalaxy/blob/main/files/citations.bib), with example text for citing **PyAutoGalaxy**
+in [.tex format here](https://github.com/PyAutoLabs/PyAutoGalaxy/blob/main/files/citations.tex) format here and
+[.md format here](https://github.com/PyAutoLabs/PyAutoGalaxy/blob/main/files/citations.md).
 
 As shown in the examples, we would greatly appreciate it if you mention **PyAutoGalaxy** by name and include a link to
 our GitHub page!

CODE_OF_CONDUCT.md

@@ -301,7 +301,7 @@ the situation is not yet resolved.
 
 ## License
 
-This code of conduct has been adapted from [*NUMFOCUS code of conduct*](https://github.com/numfocus/numfocus/blob/main/manual/numfocus-coc.md#the-short-version),
-which is adapted from numerous sources, including the [*Geek Feminism wiki, created by the Ada Initiative and other volunteers, which is under a Creative Commons Zero license*](http://geekfeminism.wikia.com/wiki/Conference_anti-harassment/Policy), the [*Contributor Covenant version 1.2.0*](http://contributor-covenant.org/version/1/2/0/), the [*Bokeh Code of Conduct*](https://github.com/bokeh/bokeh/blob/main/CODE_OF_CONDUCT.md), the [*SciPy Code of Conduct*](https://github.com/jupyter/governance/blob/main/conduct/enforcement.md), the [*Carpentries Code of Conduct*](https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html#enforcement-manual), and the [*NeurIPS Code of Conduct*](https://neurips.cc/public/CodeOfConduct).
+This code of conduct has been adapted from [*NUMFOCUS code of conduct*](https://numfocus.org/code-of-conduct),
+which is adapted from numerous sources, including the [*Geek Feminism wiki, created by the Ada Initiative and other volunteers, which is under a Creative Commons Zero license*](http://geekfeminism.wikia.com/wiki/Conference_anti-harassment/Policy), the [*Contributor Covenant version 1.2.0*](http://contributor-covenant.org/version/1/2/0/), the [*Bokeh Code of Conduct*](https://github.com/bokeh/bokeh/blob/main/docs/CODE_OF_CONDUCT.md), the [*SciPy Code of Conduct*](https://github.com/jupyter/governance/blob/main/conduct/enforcement.md), the [*Carpentries Code of Conduct*](https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html#enforcement-manual), and the [*NeurIPS Code of Conduct*](https://neurips.cc/public/CodeOfConduct).
 
 **PyAutoGalaxy Code of Conduct is licensed under the [Creative Commons Attribution 3.0 Unported License](https://creativecommons.org/licenses/by/3.0/).**

notebooks/chapter_1_introduction/tutorial_1_grids_and_galaxies.ipynb

@@ -11,7 +11,7 @@
         "ellipticals, spirals and irregulars. He produced a diagram of these galaxies, called the Hubble Tuning Fork, which\n",
         "is shown below and still discussed by astronomers in the modern day:\n",
         "\n",
-        "![HubbleTuning](https://github.com/Jammy2211/autogalaxy_workspace/blob/main/scripts/chapter_1_introduction/HubbleTuningFork.jpg)\n",
+        "![HubbleTuning](https://github.com/PyAutoLabs/autogalaxy_workspace/blob/main/scripts/chapter_1_introduction/HubbleTuningFork.jpg)\n",
         "\n",
         "To make his diagram, Hubble looked at images of each galaxy in his sample, and subjectively judged by eye how\n",
         "to classify it. Today, Astronomers use computer software, statistical algorithms and image processing techniques to\n",

notebooks/chapter_1_introduction/tutorial_5_summary.ipynb

@@ -217,11 +217,11 @@
         "code at some point in the future. Firstly, you should note that all of the code we discuss throughout the **HowToGalaxy** \n",
         "lectures is not contained in just one project (e.g. the **PyAutoGalaxy** GitHub repository) but in fact three repositories:\n",
         "\n",
-        "**PyAutoFit** - Everything required for modeling (the topic of chapter 2): https://github.com/rhayes777/PyAutoFit\n",
+        "**PyAutoFit** - Everything required for modeling (the topic of chapter 2): https://github.com/PyAutoLabs/PyAutoFit\n",
         "\n",
-        "**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/Jammy2211/PyAutoArray\n",
+        "**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/PyAutoLabs/PyAutoArray\n",
         "\n",
-        "**PyAutoGalaxy** - Contains the light profiles and galaxies: https://github.com/Jammy2211/PyAutoGalaxy\n",
+        "**PyAutoGalaxy** - Contains the light profiles and galaxies: https://github.com/PyAutoLabs/PyAutoGalaxy\n",
         "\n",
         "Instructions on how to build these projects from source are provided here:\n",
         "\n",
@@ -241,7 +241,7 @@
         "Finally, if you enjoyed doing the **HowToGalaxy** tutorials please git us a star on the **PyAutoGalaxy** GitHub\n",
         "repository: \n",
         "\n",
-        " https://github.com/Jammy2211/PyAutoGalaxy\n",
+        " https://github.com/PyAutoLabs/PyAutoGalaxy\n",
         "\n",
         "Even the smallest bit of exposure via a GitHub star can help our project grow!"
       ]

notebooks/chapter_2_modeling/tutorial_1_non_linear_search.ipynb

@@ -188,7 +188,7 @@
         "__PyAutoFit__\n",
         "\n",
         "Modeling uses the probabilistic programming language\n",
-        "[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model\n",
+        "[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model\n",
         "fitting techniques to be straightforwardly integrated into scientific modeling software. \n",
         "\n",
         "**PyAutoFit** is actually a spin-off project of **PyAutoGalaxy**. whereby we found that the statistic techniques and\n",

notebooks/chapter_2_modeling/tutorial_2_practicalities.ipynb

@@ -63,7 +63,7 @@
         "__PyAutoFit__\n",
         "\n",
         "Modeling uses the probabilistic programming language\n",
-        "[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model\n",
+        "[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model\n",
         "fitting techniques to be straightforwardly integrated into scientific modeling software. \n",
         "\n",
         "The majority of tools that make model-fitting practical are provided by PyAutoFit, for example it handles\n",

scripts/chapter_1_introduction/tutorial_1_grids_and_galaxies.py

@@ -6,7 +6,7 @@
 ellipticals, spirals and irregulars. He produced a diagram of these galaxies, called the Hubble Tuning Fork, which
 is shown below and still discussed by astronomers in the modern day:
 
-![HubbleTuning](https://github.com/Jammy2211/autogalaxy_workspace/blob/main/scripts/chapter_1_introduction/HubbleTuningFork.jpg)
+![HubbleTuning](https://github.com/PyAutoLabs/autogalaxy_workspace/blob/main/scripts/chapter_1_introduction/HubbleTuningFork.jpg)
 
 To make his diagram, Hubble looked at images of each galaxy in his sample, and subjectively judged by eye how
 to classify it. Today, Astronomers use computer software, statistical algorithms and image processing techniques to

scripts/chapter_1_introduction/tutorial_5_summary.py

@@ -146,11 +146,11 @@
 code at some point in the future. Firstly, you should note that all of the code we discuss throughout the **HowToGalaxy** 
 lectures is not contained in just one project (e.g. the **PyAutoGalaxy** GitHub repository) but in fact three repositories:
 
-**PyAutoFit** - Everything required for modeling (the topic of chapter 2): https://github.com/rhayes777/PyAutoFit
+**PyAutoFit** - Everything required for modeling (the topic of chapter 2): https://github.com/PyAutoLabs/PyAutoFit
 
-**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/Jammy2211/PyAutoArray
+**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/PyAutoLabs/PyAutoArray
 
-**PyAutoGalaxy** - Contains the light profiles and galaxies: https://github.com/Jammy2211/PyAutoGalaxy
+**PyAutoGalaxy** - Contains the light profiles and galaxies: https://github.com/PyAutoLabs/PyAutoGalaxy
 
 Instructions on how to build these projects from source are provided here:
 
@@ -170,7 +170,7 @@
 Finally, if you enjoyed doing the **HowToGalaxy** tutorials please git us a star on the **PyAutoGalaxy** GitHub
 repository: 
 
- https://github.com/Jammy2211/PyAutoGalaxy
+ https://github.com/PyAutoLabs/PyAutoGalaxy
 
 Even the smallest bit of exposure via a GitHub star can help our project grow!
 """

scripts/chapter_2_modeling/tutorial_1_non_linear_search.py

@@ -172,7 +172,7 @@
 __PyAutoFit__
 
 Modeling uses the probabilistic programming language
-[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model
+[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model
 fitting techniques to be straightforwardly integrated into scientific modeling software. 
 
 **PyAutoFit** is actually a spin-off project of **PyAutoGalaxy**. whereby we found that the statistic techniques and

scripts/chapter_2_modeling/tutorial_2_practicalities.py

@@ -47,7 +47,7 @@
 __PyAutoFit__
 
 Modeling uses the probabilistic programming language
-[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model
+[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model
 fitting techniques to be straightforwardly integrated into scientific modeling software. 
 
 The majority of tools that make model-fitting practical are provided by PyAutoFit, for example it handles