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Use latest zenodo data with fixed CIVic.bed
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Previous version of the bed file contained two lines with START > STOP,
which caused recent version of tabix to refuse indexing the file.
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wm75 committed May 23, 2023
1 parent 0726551 commit 28178b1
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Showing 2 changed files with 7 additions and 7 deletions.
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Expand Up @@ -685,12 +685,12 @@ license.
> <hands-on-title>Data upload</hands-on-title>
>
> 1. Import the following **variant annotation files** from
> [Zenodo](https://zenodo.org/record/2581873):
> [Zenodo](https://zenodo.org/record/7962928):
>
> ```
> https://zenodo.org/record/2581873/files/hotspots.bed
> https://zenodo.org/record/2581873/files/cgi_variant_positions.bed
> https://zenodo.org/record/2581873/files/01-Feb-2019-CIVic.bed
> https://zenodo.org/record/7962928/files/hotspots.bed
> https://zenodo.org/record/7962928/files/cgi_variant_positions.bed
> https://zenodo.org/record/7962928/files/01-Feb-2019-CIVic.bed
> https://zenodo.org/record/2582555/files/dbsnp.b147.chr5_12_17.vcf.gz
> ```
>
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Original file line number Diff line number Diff line change
Expand Up @@ -23,15 +23,15 @@
filetype: fasta
hotspots.bed:
class: File
location: https://zenodo.org/record/2581873/files/hotspots.bed
location: https://zenodo.org/record/7962928/files/hotspots.bed
filetype: bed
cgi_variant_positions.bed:
class: File
location: https://zenodo.org/record/2581873/files/cgi_variant_positions.bed
location: https://zenodo.org/record/7962928/files/cgi_variant_positions.bed
filetype: bed
01-Feb-2019-CIVic.bed:
class: File
location: https://zenodo.org/record/2581873/files/01-Feb-2019-CIVic.bed
location: https://zenodo.org/record/7962928/files/01-Feb-2019-CIVic.bed
filetype: bed
Uniprot_Cancer_Genes.13Feb2019.txt:
class: File
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