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Merge pull request galaxyproject#4175 from FynnBe/patch-1
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Suggestions for BioImage Model Zoo slides
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shiltemann authored May 24, 2023
2 parents 31db5df + 7dd4d8f commit 4aa1413
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6 changes: 3 additions & 3 deletions topics/ai4life/tutorials/contribute-materials/slides.html
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* Static Validation of the model format using the bioimage.core python library
```
python bioimageio validate /../rdf.yaml
bioimageio validate /../rdf.yaml
```
* Dynamic Validation of the model's deployment
```
python test_model --weights tensorflow_saved_model_bundle --device cpu /.../rdf.yaml
bioimageio test-model --weights tensorflow_saved_model_bundle --device cpu /.../rdf.yaml
```

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Remember that you can always read our documentation or additional information on this topic or others in our resources.
For example, you could check how to get most of your model documentation and considerations for the model description file.
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8 changes: 4 additions & 4 deletions topics/ai4life/tutorials/getting-started/slides.html
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questions:
- What is BioImage Model Zoo?
- Who participates in the BioImage Model Zoo?
- Who can participate in BioImage Model Zoo?
- Who can participate in the BioImage Model Zoo?
objectives:
- Share what BioImage Model Zoo is.
- Provide a general view of what can be done with BioImage Model Zoo.
- Explain who can and should participate into the BioImage Model Zoo.
- Explain who can and should contribute to the BioImage Model Zoo.
time_estimation: "5m"
contributors:
- cfusterbarcelo
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- Integrated with Fiji, ilastik, ImJoy and more
- Try model instantly with BioEngine
- Contribute your models via Github
- Contribute your models via bioimage.io or Zenodo
- Link models to datasets and applications
[Explore the zoo!](https://bioimage.io/#/)

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- People will be using your models and citing you!

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There are many reasons for which you should be using the bioimage.io to run and upload your models. One of them is that we are an open-source project and we believe in sharing. And then, if you are willing to run deep-learning models, you will be able to do it in many different user-friendly softwares. Or, if you have a model and you want to upload it, you can share it among many people that will use it and cite you.
There are many reasons for which you should be using the bioimage.io to run and upload your models. One of them is that we are an open-source project and we believe in sharing. And then, if you are willing to run deep-learning models, you will be able to do it in many different user-friendly softwares. Or, if you have a model and you want to upload it, you can share it among many people that will use it and cite you.

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