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29 Open 152 Closed
29 Open 152 Closed
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Issues list

publish to PyPy broken after switch to uv bug Something isn't working
#341 opened May 29, 2025 by emlynjdavies
1
@emlynjdavies
3
Re-train classifier with PySilCam architecture major new feature Changes in high-level pipeline use and/or data output that are not backwards-compatible
#339 opened Apr 10, 2025 by nepstad DTO-BioFlow
1
image2blackwhite_accurate is not possible to use in high-level processing
#338 opened Apr 3, 2025 by emlynjdavies
Metadata helper
#334 opened Mar 15, 2025 by nepstad DTO-BioFlow
Make STATS netCDF CF compliant, add metadata, units etc. documentation Improvements or additions to documentation patch / enhancement improved functionality or patch indented for changes that require bumping only the PATCH number
#333 opened Mar 11, 2025 by nepstad DTO-BioFlow
1
@nepstad
1
Add export step in PyOPIA for EcoTaxa data bundle import
#332 opened Mar 7, 2025 by nepstad DTO-BioFlow
Logging handling is not multiprocess safe bug Something isn't working patch / enhancement improved functionality or patch indented for changes that require bumping only the PATCH number priority-low
#331 opened Nov 4, 2024 by nepstad
Unable to download silcam_database.zip from exampledata.py bug Something isn't working
#329 opened Oct 18, 2024 by arsalanmstn
2
Add more info to error messages in log
#310 opened Sep 22, 2024 by nordam
1
docstring for SilCamLoad image_format is lowercase, but should be upper case string inputs bug Something isn't working documentation Improvements or additions to documentation
#306 opened Sep 20, 2024 by emlynjdavies
Tell user why the remaining steps are being skipped documentation Improvements or additions to documentation minor new feature intended for changes that require bumping MINOR version. New features that are backwards-compatible.
#304 opened Sep 20, 2024 by nordam
@nordam
2
Add version information to PyOPIA command line interface documentation Improvements or additions to documentation minor new feature intended for changes that require bumping MINOR version. New features that are backwards-compatible.
#303 opened Sep 20, 2024 by nepstad
1
broken reference link in parallell-processing documentation bug Something isn't working documentation Improvements or additions to documentation
#301 opened Sep 20, 2024 by emlynjdavies
Add PyOPIA reference publication to README and documentation documentation Improvements or additions to documentation
#300 opened Sep 20, 2024 by nepstad
@nordam
5
Suspected memory leak when processing large datasets with append=false bug Something isn't working
#296 opened Sep 19, 2024 by nordam
1
@nepstad
2
Move to more flexible image containers for SilCam patch / enhancement improved functionality or patch indented for changes that require bumping only the PATCH number
#288 opened Sep 18, 2024 by nepstad
2
misleading error message for empty directory bug Something isn't working
#279 opened Sep 13, 2024 by emlynjdavies
Better handling of occluded particles patch / enhancement improved functionality or patch indented for changes that require bumping only the PATCH number
#240 opened Sep 3, 2024 by nepstad
Add docs/notebooks to test_notebooks testing
#237 opened Sep 3, 2024 by nepstad
Explicit handling of images exceeding concentration limit patch / enhancement improved functionality or patch indented for changes that require bumping only the PATCH number
#226 opened Aug 30, 2024 by nepstad
Consider better packaging of h5 files from exported ROIs major new feature Changes in high-level pipeline use and/or data output that are not backwards-compatible
#209 opened Aug 26, 2024 by emlynjdavies
6
Implement optional stats output format compatible with UVP-ARGO netcdf minor new feature intended for changes that require bumping MINOR version. New features that are backwards-compatible.
#207 opened Aug 26, 2024 by nepstad DTO-BioFlow
@nepstad
3
Consider testing on spherical standards data testing
#200 opened Aug 21, 2024 by emlynjdavies
Consider tests with synthetic data and statistical size distributions testing
#199 opened Aug 21, 2024 by emlynjdavies
Move Classification and ROI export to separate pipeline step major new feature Changes in high-level pipeline use and/or data output that are not backwards-compatible
#170 opened Aug 9, 2024 by nepstad DTO-BioFlow
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