Updated Dockerfile

docker/Dockerfile

@@ -1,75 +1,17 @@
-FROM nvidia/cuda:9.0-devel
+FROM nvidia/cuda:10.0-devel
 MAINTAINER Ben Shealy <[email protected]>
 
 # install package dependencies
 RUN apt-get update -qq \
 	&& apt-get install -qq -y \
-		wget xz-utils \
-		build-essential pkg-config libgl1-mesa-dev \
+		qt5-default \
 		clinfo git libgsl-dev liblapacke-dev libopenblas-dev libopenmpi-dev ocl-icd-opencl-dev \
 		python3-pip
 
 # add NVIDIA platform to OpenCL
 RUN mkdir -p /etc/OpenCL/vendors \
 	&& echo "libnvidia-opencl.so.1" > /etc/OpenCL/vendors/nvidia.icd
 
-# install Qt
-WORKDIR /opt
-
-ENV QTDIR "/opt/Qt-5.11.1"
-ENV PATH "$QTDIR/bin:$PATH"
-
-RUN wget -q http://download.qt.io/official_releases/qt/5.11/5.11.1/single/qt-everywhere-src-5.11.1.tar.xz \
-	&& tar -xf qt-everywhere-src-5.11.1.tar.xz \
-	&& rm qt-everywhere-src-5.11.1.tar.xz \
-	&& cd qt-everywhere-src-5.11.1 \
-	&& ./configure -opensource -confirm-license -prefix $QTDIR \
-		-no-compile-examples \
-		-no-widgets \
-		-skip qt3d \
-		-skip qtactiveqt \
-		-skip qtandroidextras \
-		-skip qtcanvas3d \
-		-skip qtcharts \
-		-skip qtconnectivity \
-		-skip qtdatavis3d \
-		-skip qtdeclarative \
-		-skip qtdoc \
-		-skip qtgamepad \
-		-skip qtgraphicaleffects \
-		-skip qtimageformats \
-		-skip qtlocation \
-		-skip qtmacextras \
-		-skip qtmultimedia \
-		-skip qtnetworkauth \
-		-skip qtpurchasing \
-		-skip qtquickcontrols \
-		-skip qtquickcontrols2 \
-		-skip qtremoteobjects \
-		-skip qtscript \
-		-skip qtscxml \
-		-skip qtsensors \
-		-skip qtserialbus \
-		-skip qtserialport \
-		-skip qtspeech \
-		-skip qtsvg \
-		-skip qttools \
-		-skip qttranslations \
-		-skip qtvirtualkeyboard \
-		-skip qtwayland \
-		-skip qtwebchannel \
-		-skip qtwebengine \
-		-skip qtwebglplugin \
-		-skip qtwebsockets \
-		-skip qtwebview \
-		-skip qtwinextras \
-		-skip qtx11extras \
-		-skip qtxmlpatterns \
-	&& make -s -j $(nproc) \
-	&& make -s install \
-	&& cd .. \
-	&& rm -rf qt-everywhere-src-5.11.1
-
 # install python dependencies
 RUN pip3 install -q argparse matplotlib numpy pandas scipy seaborn
 
@@ -87,7 +29,7 @@ WORKDIR /opt
 
 RUN git clone https://github.com/SystemsGenetics/ACE.git \
 	&& cd ACE/build \
-	&& git checkout v3.0.2 \
+	&& git checkout -q v3.1.0 \
 	&& qmake ../src/ACE.pro GUI=no \
 	&& make -s -j $(nproc) \
 	&& make -s qmake_all \
@@ -100,7 +42,7 @@ WORKDIR /opt
 
 RUN git clone https://github.com/SystemsGenetics/KINC.git \
 	&& cd KINC/build \
-	&& git checkout v3.2.2 \
+	&& git checkout -q v3.3.0 \
 	&& qmake ../src/KINC.pro GUI=no \
 	&& make -s -j $(nproc) \
 	&& make -s qmake_all \