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@WEHI-SODA-Hub

WEHI SODA Hub

Spatial Omics Data Analytics Hub based at The Walter and Eliza Hall Institute of Medical Research

Popular repositories Loading

  1. RdfCrate RdfCrate Public

    Library for building RO-Crates using rdflib

    Python 2

  2. vizgen-postprocessing_container vizgen-postprocessing_container Public

    Container for running vizgen-postprocessing tool with the cellpose2 plugin

    Dockerfile

  3. spatialvpt spatialvpt Public

    Segmentation and QC workflow for MERSCOPE using vizgen-postprocessing tool

    Nextflow

  4. ro-crate-py ro-crate-py Public

    Forked from ResearchObject/ro-crate-py

    Python library for RO-Crate

    Jupyter Notebook

  5. MibiSegmentation MibiSegmentation Public

    Python

  6. spatialVis spatialVis Public

    R package for downstream plots and spatial analyses for MIBI

    R

Repositories

Showing 8 of 8 repositories
  • proclaim Public

    RO-Crate profile generator from LinkML

    WEHI-SODA-Hub/proclaim’s past year of commit activity
    Python 0 0 0 0 Updated Jan 31, 2025
  • MibiSegmentation Public
    WEHI-SODA-Hub/MibiSegmentation’s past year of commit activity
    Python 0 0 0 0 Updated Jan 28, 2025
  • cordful Public

    LinkML implementation of various linked data schemas, profiles vocabularies and ontologies

    WEHI-SODA-Hub/cordful’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 24, 2025
  • spatialVis Public

    R package for downstream plots and spatial analyses for MIBI

    WEHI-SODA-Hub/spatialVis’s past year of commit activity
    R 0 0 0 0 Updated Jan 23, 2025
  • RdfCrate Public

    Library for building RO-Crates using rdflib

    WEHI-SODA-Hub/RdfCrate’s past year of commit activity
    Python 2 MIT 0 5 0 Updated Jan 21, 2025
  • spatialvpt Public

    Segmentation and QC workflow for MERSCOPE using vizgen-postprocessing tool

    WEHI-SODA-Hub/spatialvpt’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Jan 6, 2025
  • ro-crate-py Public Forked from ResearchObject/ro-crate-py

    Python library for RO-Crate

    WEHI-SODA-Hub/ro-crate-py’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 30 0 0 Updated Sep 26, 2024
  • vizgen-postprocessing_container Public

    Container for running vizgen-postprocessing tool with the cellpose2 plugin

    WEHI-SODA-Hub/vizgen-postprocessing_container’s past year of commit activity
    Dockerfile 0 Apache-2.0 0 0 0 Updated Aug 26, 2024

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