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1. bedops/bedops bedops/bedops Public

   🔬 BEDOPS: high-performance genomic feature operations

   C 327 61

2. sample sample Public

   Performs memory-efficient reservoir sampling on very large input files delimited by newlines

   C 69 12

3. filter-regions filter-regions Public

   Filter genomic regions by score and proximity

   Python 1

4. byte-store byte-store Public

   Generate and explore upper triangular and square matrices of 1-byte values

   C 2 2

5. kmer-collapse kmer-collapse Public

   Collapse a set of redundant kmers to use IUPAC degenerate bases

   Python 3

6. dt-slurm-proxy dt-slurm-proxy Public

   This Flask/nginx/uWSGI/mongoDB application provides endpoints for submitting and monitoring jobs sent to a SLURM scheduler, for the purpose of integration with a predefined set of CLI tools

   Python