Built site for gh-pages

aml4td · Mar 29, 2024 · 37c1215 · 37c1215
1 parent 21534d1
commit 37c1215
Show file tree

Hide file tree

Showing 26 changed files with 70,296 additions and 39,679 deletions.
diff --git a/.nojekyll b/.nojekyll
@@ -1 +1 @@
-ac4999b2
+205ae18e
diff --git a/CNAME b/CNAME
@@ -1 +1 @@
-tidymodels.aml4td.org
+tidymodels.aml4td.org
diff --git a/chapters/categorical-predictors.html b/chapters/categorical-predictors.html
diff --git a/chapters/contributing.html b/chapters/contributing.html
@@ -2,9 +2,9 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.510">
+<meta name="generator" content="quarto-1.5.4">
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
-<title>Tidymodels Computing Supplement - Contributing</title>
+<title>Tidymodels Computing Supplement – Contributing</title>
 <style>
 code{white-space: pre-wrap;}
 span.smallcaps{font-variant: small-caps;}
@@ -57,6 +57,7 @@
     "search-more-match-text": "more match in this document",
     "search-more-matches-text": "more matches in this document",
     "search-clear-button-title": "Clear",
+    "search-text-placeholder": "",
     "search-detached-cancel-button-title": "Cancel",
     "search-submit-button-title": "Submit",
     "search-label": "Search"
@@ -161,6 +162,18 @@ <h1 class="quarto-secondary-nav-title">Contributing</h1>
   <a href="../chapters/initial-data-splitting.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Initial Data Splitting</span></span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/numeric-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Transforming Numeric Predictors</span></span></a>
+  </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/categorical-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">Working with Categorical Predictors</span></span></a>
+  </div>
 </li>
         <li class="sidebar-item sidebar-item-section">
       <span class="sidebar-item-text sidebar-link text-start">
@@ -458,27 +471,6 @@ <h1 class="title d-none d-lg-block">Contributing</h1>
       }
     }
     stripColumnClz(note)
-    const typesetMath = (el) => {
-      if (window.MathJax) {
-        // MathJax Typeset
-        window.MathJax.typeset([el]);
-      } else if (window.katex) {
-        // KaTeX Render
-        var mathElements = el.getElementsByClassName("math");
-        var macros = [];
-        for (var i = 0; i < mathElements.length; i++) {
-          var texText = mathElements[i].firstChild;
-          if (mathElements[i].tagName == "SPAN") {
-            window.katex.render(texText.data, mathElements[i], {
-              displayMode: mathElements[i].classList.contains('display'),
-              throwOnError: false,
-              macros: macros,
-              fleqn: false
-            });
-          }
-        }
-      }
-    }
     if (id === null || id.startsWith('sec-')) {
       // Special case sections, only their first couple elements
       const container = document.createElement("div");
@@ -493,10 +485,14 @@ <h1 class="title d-none d-lg-block">Contributing</h1>
             break;
           }
         }
-        typesetMath(container);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(container);
+        }
         return container.innerHTML
       } else {
-        typesetMath(note);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(note);
+        }
         return note.innerHTML;
       }
     } else {
@@ -505,8 +501,15 @@ <h1 class="title d-none d-lg-block">Contributing</h1>
       if (anchorLink) {
         anchorLink.remove();
       }
-      typesetMath(note);
-      return note.innerHTML;
+      if (window.Quarto?.typesetMath) {
+        window.Quarto.typesetMath(note);
+      }
+      // TODO in 1.5, we should make sure this works without a callout special case
+      if (note.classList.contains("callout")) {
+        return note.outerHTML;
+      } else {
+        return note.innerHTML;
+      }
     }
   }
   for (var i=0; i<xrefs.length; i++) {

diff --git a/chapters/initial-data-splitting.html b/chapters/initial-data-splitting.html
@@ -2,9 +2,9 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.510">
+<meta name="generator" content="quarto-1.5.4">
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
-<title>Tidymodels Computing Supplement - 3&nbsp; Initial Data Splitting</title>
+<title>Tidymodels Computing Supplement – 3&nbsp; Initial Data Splitting</title>
 <style>
 code{white-space: pre-wrap;}
 span.smallcaps{font-variant: small-caps;}
@@ -60,6 +60,7 @@
 <script src="../site_libs/quarto-search/fuse.min.js"></script>
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
+<link href="../chapters/numeric-predictors.html" rel="next">
 <link href="../chapters/whole-game.html" rel="prev">
 <script src="../site_libs/quarto-html/quarto.js"></script>
 <script src="../site_libs/quarto-html/popper.min.js"></script>
@@ -90,6 +91,7 @@
     "search-more-match-text": "more match in this document",
     "search-more-matches-text": "more matches in this document",
     "search-clear-button-title": "Clear",
+    "search-text-placeholder": "",
     "search-detached-cancel-button-title": "Cancel",
     "search-submit-button-title": "Submit",
     "search-label": "Search"
@@ -194,6 +196,18 @@ <h1 class="quarto-secondary-nav-title"><span id="sec-initial-data-splitting" cla
   <a href="../chapters/initial-data-splitting.html" class="sidebar-item-text sidebar-link active">
  <span class="menu-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Initial Data Splitting</span></span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/numeric-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Transforming Numeric Predictors</span></span></a>
+  </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/categorical-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">Working with Categorical Predictors</span></span></a>
+  </div>
 </li>
         <li class="sidebar-item sidebar-item-section">
       <span class="sidebar-item-text sidebar-link text-start">
@@ -255,8 +269,12 @@ <h1 class="title d-none d-lg-block"><span id="sec-initial-data-splitting" class=
 <div class="sourceCode" id="cb1"><pre class="downlit sourceCode r code-with-copy"><code class="sourceCode R"><span><span class="va">req_pkg</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html">c</a></span><span class="op">(</span><span class="st">"caret"</span>, <span class="st">"tidymodels"</span><span class="op">)</span></span>
 <span></span>
 <span><span class="co"># Check to see if they are installed: </span></span>
-<span><span class="kw">if</span> <span class="op">(</span><span class="op">!</span><span class="fu">rlang</span><span class="fu">::</span><span class="fu"><a href="https://rlang.r-lib.org/reference/is_installed.html">is_installed</a></span><span class="op">(</span><span class="va">req_pkg</span><span class="op">)</span><span class="op">)</span> <span class="op">{</span></span>
-<span>  <span class="fu">pak</span><span class="fu">::</span><span class="fu"><a href="https://pak.r-lib.org/reference/pak.html">pak</a></span><span class="op">(</span><span class="va">req_pkg</span><span class="op">)</span></span>
+<span><span class="va">pkg_installed</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html">vapply</a></span><span class="op">(</span><span class="va">req_pkg</span>, <span class="fu">rlang</span><span class="fu">::</span><span class="va"><a href="https://rlang.r-lib.org/reference/is_installed.html">is_installed</a></span>, <span class="fu"><a href="https://rdrr.io/r/base/logical.html">logical</a></span><span class="op">(</span><span class="fl">1</span><span class="op">)</span><span class="op">)</span></span>
+<span></span>
+<span><span class="co"># Install missing packages: </span></span>
+<span><span class="kw">if</span> <span class="op">(</span> <span class="fu"><a href="https://rdrr.io/r/base/any.html">any</a></span><span class="op">(</span><span class="op">!</span><span class="va">pkg_installed</span><span class="op">)</span> <span class="op">)</span> <span class="op">{</span></span>
+<span>  <span class="va">install_list</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/names.html">names</a></span><span class="op">(</span><span class="va">pkg_installed</span><span class="op">)</span><span class="op">[</span><span class="op">!</span><span class="va">pkg_installed</span><span class="op">]</span></span>
+<span>  <span class="fu">pak</span><span class="fu">::</span><span class="fu"><a href="https://pak.r-lib.org/reference/pak.html">pak</a></span><span class="op">(</span><span class="va">install_list</span><span class="op">)</span></span>
 <span><span class="op">}</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </div>
 <p>Let’s load the meta package and manage some between-package function conflicts.</p>
@@ -573,27 +591,6 @@ <h1 class="title d-none d-lg-block"><span id="sec-initial-data-splitting" class=
       }
     }
     stripColumnClz(note)
-    const typesetMath = (el) => {
-      if (window.MathJax) {
-        // MathJax Typeset
-        window.MathJax.typeset([el]);
-      } else if (window.katex) {
-        // KaTeX Render
-        var mathElements = el.getElementsByClassName("math");
-        var macros = [];
-        for (var i = 0; i < mathElements.length; i++) {
-          var texText = mathElements[i].firstChild;
-          if (mathElements[i].tagName == "SPAN") {
-            window.katex.render(texText.data, mathElements[i], {
-              displayMode: mathElements[i].classList.contains('display'),
-              throwOnError: false,
-              macros: macros,
-              fleqn: false
-            });
-          }
-        }
-      }
-    }
     if (id === null || id.startsWith('sec-')) {
       // Special case sections, only their first couple elements
       const container = document.createElement("div");
@@ -608,10 +605,14 @@ <h1 class="title d-none d-lg-block"><span id="sec-initial-data-splitting" class=
             break;
           }
         }
-        typesetMath(container);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(container);
+        }
         return container.innerHTML
       } else {
-        typesetMath(note);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(note);
+        }
         return note.innerHTML;
       }
     } else {
@@ -620,8 +621,15 @@ <h1 class="title d-none d-lg-block"><span id="sec-initial-data-splitting" class=
       if (anchorLink) {
         anchorLink.remove();
       }
-      typesetMath(note);
-      return note.innerHTML;
+      if (window.Quarto?.typesetMath) {
+        window.Quarto.typesetMath(note);
+      }
+      // TODO in 1.5, we should make sure this works without a callout special case
+      if (note.classList.contains("callout")) {
+        return note.outerHTML;
+      } else {
+        return note.innerHTML;
+      }
     }
   }
   for (var i=0; i<xrefs.length; i++) {
@@ -847,6 +855,9 @@ <h1 class="title d-none d-lg-block"><span id="sec-initial-data-splitting" class=
       </a>          
   </div>
   <div class="nav-page nav-page-next">
+      <a href="../chapters/numeric-predictors.html" class="pagination-link" aria-label="<span class='chapter-number'>4</span>&nbsp; <span class='chapter-title'>Transforming Numeric Predictors</span>">
+        <span class="nav-page-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Transforming Numeric Predictors</span></span> <i class="bi bi-arrow-right-short"></i>
+      </a>
   </div>
 </nav>
 </div> <!-- /content -->

diff --git a/chapters/introduction.html b/chapters/introduction.html
@@ -2,9 +2,9 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.510">
+<meta name="generator" content="quarto-1.5.4">
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
-<title>Tidymodels Computing Supplement - 1&nbsp; Introduction</title>
+<title>Tidymodels Computing Supplement – 1&nbsp; Introduction</title>
 <style>
 code{white-space: pre-wrap;}
 span.smallcaps{font-variant: small-caps;}
@@ -91,6 +91,7 @@
     "search-more-match-text": "more match in this document",
     "search-more-matches-text": "more matches in this document",
     "search-clear-button-title": "Clear",
+    "search-text-placeholder": "",
     "search-detached-cancel-button-title": "Cancel",
     "search-submit-button-title": "Submit",
     "search-label": "Search"
@@ -195,6 +196,18 @@ <h1 class="quarto-secondary-nav-title"><span id="sec-introduction" class="quarto
   <a href="../chapters/initial-data-splitting.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Initial Data Splitting</span></span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/numeric-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Transforming Numeric Predictors</span></span></a>
+  </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../chapters/categorical-predictors.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">Working with Categorical Predictors</span></span></a>
+  </div>
 </li>
         <li class="sidebar-item sidebar-item-section">
       <span class="sidebar-item-text sidebar-link text-start">
@@ -452,12 +465,12 @@ <h1 class="title d-none d-lg-block"><span id="sec-introduction" class="quarto-se
 </div>
 
 
-</section><aside id="footnotes" class="footnotes footnotes-end-of-document" role="doc-endnotes"><hr>
+</section><section id="footnotes" class="footnotes footnotes-end-of-document" role="doc-endnotes"><hr>
 <ol>
 <li id="fn1"><p>The Comprehensive R Archive Network<a href="#fnref1" class="footnote-back" role="doc-backlink">↩︎</a></p></li>
 <li id="fn2"><p>The syntax <code>foo::bar()</code> means that the function <code>bar()</code> is inside of the package <span class="pkg"><a href="https://cran.r-project.org/package=foo">foo</a></span> When used together, this is often referred to as “calling the function by its namespace.”. You can do this in your code, and developers often do. However, it’s fairly ugly. <a href="#fnref2" class="footnote-back" role="doc-backlink">↩︎</a></p></li>
 <li id="fn3"><p>Unfortunately, this is not a guarantee but it does work most of the time.<a href="#fnref3" class="footnote-back" role="doc-backlink">↩︎</a></p></li>
-</ol></aside></main><!-- /main --><script id="quarto-html-after-body" type="application/javascript">
+</ol></section></main><!-- /main --><script id="quarto-html-after-body" type="application/javascript">
 window.document.addEventListener("DOMContentLoaded", function (event) {
   const toggleBodyColorMode = (bsSheetEl) => {
     const mode = bsSheetEl.getAttribute("data-mode");
@@ -585,27 +598,6 @@ <h1 class="title d-none d-lg-block"><span id="sec-introduction" class="quarto-se
       }
     }
     stripColumnClz(note)
-    const typesetMath = (el) => {
-      if (window.MathJax) {
-        // MathJax Typeset
-        window.MathJax.typeset([el]);
-      } else if (window.katex) {
-        // KaTeX Render
-        var mathElements = el.getElementsByClassName("math");
-        var macros = [];
-        for (var i = 0; i < mathElements.length; i++) {
-          var texText = mathElements[i].firstChild;
-          if (mathElements[i].tagName == "SPAN") {
-            window.katex.render(texText.data, mathElements[i], {
-              displayMode: mathElements[i].classList.contains('display'),
-              throwOnError: false,
-              macros: macros,
-              fleqn: false
-            });
-          }
-        }
-      }
-    }
     if (id === null || id.startsWith('sec-')) {
       // Special case sections, only their first couple elements
       const container = document.createElement("div");
@@ -620,10 +612,14 @@ <h1 class="title d-none d-lg-block"><span id="sec-introduction" class="quarto-se
             break;
           }
         }
-        typesetMath(container);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(container);
+        }
         return container.innerHTML
       } else {
-        typesetMath(note);
+        if (window.Quarto?.typesetMath) {
+          window.Quarto.typesetMath(note);
+        }
         return note.innerHTML;
       }
     } else {
@@ -632,8 +628,15 @@ <h1 class="title d-none d-lg-block"><span id="sec-introduction" class="quarto-se
       if (anchorLink) {
         anchorLink.remove();
       }
-      typesetMath(note);
-      return note.innerHTML;
+      if (window.Quarto?.typesetMath) {
+        window.Quarto.typesetMath(note);
+      }
+      // TODO in 1.5, we should make sure this works without a callout special case
+      if (note.classList.contains("callout")) {
+        return note.outerHTML;
+      } else {
+        return note.innerHTML;
+      }
     }
   }
   for (var i=0; i<xrefs.length; i++) {