Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon May 19 01:01:36 2025	Mon May 12 01:00:41 2025
1	Toolset	Mon May 19 12:59:26 2025	Mon May 12 12:58:32 2025
2	Toolset	Tue May 20 00:59:00 2025	Tue May 13 00:58:55 2025
3	Toolset	Tue May 20 13:02:02 2025	Tue May 13 12:59:40 2025
4	Toolset	Wed May 21 00:58:23 2025	Wed May 14 00:57:38 2025
5	Toolset	Wed May 21 12:57:45 2025	Wed May 14 12:58:32 2025
6	Toolset	Thu May 22 00:57:10 2025	Thu May 15 00:57:32 2025
7	Toolset	Thu May 22 13:02:23 2025	Thu May 15 12:58:31 2025
8	Toolset	Fri May 23 00:57:22 2025	Fri May 16 00:59:01 2025
9	Toolset	Fri May 16 12:58:42 2025	Fri May 09 12:55:58 2025
10	Toolset	Sat May 17 00:56:44 2025	Sat May 10 00:58:10 2025
11	Toolset	Sat May 17 12:54:36 2025	Sat May 10 12:53:54 2025
12	Toolset	Sun May 18 01:01:29 2025	Sun May 11 01:00:13 2025
13	Toolset	Sun May 18 12:53:43 2025	Sun May 11 12:54:18 2025