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  1. openfold openfold Public

    Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

    Python 3.4k 671

  2. openfold-3 openfold-3 Public

    A fully open source biomolecular structure prediction model based on AlphaFold3

    Python 710 112

  3. genie2 genie2 Public

    Protein structure diffusion model for unconditional protein generation and motif scaffolding

    Python 191 33

  4. proteinnet proteinnet Public

    Standardized data set for machine learning of protein structure

    Python 914 138

  5. hsm hsm Public

    Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."

    Jupyter Notebook 72 22

  6. confornets confornets Public

    Latents-based conformational control in OpenFold3.

    Jupyter Notebook 54 3

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