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[TODO] Checks if the tensor’s strides follow row-major order (critical for performance).

Status: Open.

#13 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Mar 10, 2026

[TODO] 2025-11-5: study new features introduced in Protenix v0.7.0

Status: Open.

#12 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Nov 5, 2025

TODO list

Status: Open.

#10 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Aug 28, 2025

TODO: After adding the "cuequivariance" option, if you want to use the CPU version of Protenix to predict a structure, you may need to modify some parameters

Status: Open.

#9 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Aug 28, 2025

TODO: The name ValueMaybeNone is confusing.

Status: Open.

#8 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Aug 27, 2025

useful resources

Status: Open.

#7 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Aug 19, 2025

TODO: Symbol Nomenclature for Glycans (SNFG)

Status: Open.

#6 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Aug 13, 2025

study each detail of the file examples/7pzb.pdb

Status: Open.

#5 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Jul 28, 2025

TODO: Questions that arise when studying how to convert a PDB file to a CIF file

Status: Open.

#4 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Jul 24, 2025

TODO: study the implementation of rdkit.Chem.AllChem.EmbedMolecule

Status: Open.

#2 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Jul 21, 2025

GPU MODE - (Mini) Competition #3. AlphaFold’s Triangle Multiplicative Update

Status: Open.

#1 In asdfefbhjy/Protenix;

· asdfefbhjy opened on Jun 30, 2025