Use read pairing information in kneaddata_bowtie2_discordant_pairs#16

Open

wbazant wants to merge 6 commits intobiobakery:masterfrom rdemko2332:master

+215-141

Commits on Feb 16, 2021

Run bowtie2 multiple times in kneaddata_discordant_pairs and --reorder
wbazant
committed

Commits on Jul 27, 2021

Allow for a file less than 100 lines
wbazant
committed