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MicroHapulator 0.6

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@standage standage released this 27 Apr 19:32
· 113 commits to main since this release

Added

  • New API and CLI entry points for computing and visualizing heterozygote balance (#122, #131).
  • New typing_rate method for the TypingResult class (#127).
  • New API function for plotting distribution of read lengths (#128).
  • New CLI entry point for downloading GRCh38 (#130).
  • New end-to-end microhap analysis pipeline and report (#129, #132).

Changed

  • Interlocus balance code updated to support generating high-resolution graphics and performing a chi-square goodness-of-fit test (#121, #131, #132).

Fixed

  • Bug with filtering/genotype calling for markers with no valid reads (#123).
  • Set 0.01 as a more reasonable default frequency for rare alleles than 0.001 (#131, #132).