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Adds full access to all cmdStan command line options. #39

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An additional private memmber variable "inOpts" is added to the StanModel object, this allows for a hierarchical struct as input which is merged with default command line options.

E.g.:
opts.optimize.iter = 5000;
sf.optimizing('data',zData,'inOpts',opts);

An additional private memmber variable "inOpts" is added to the StanModel object, this allows for a hirerchical struct as input which is merged with default command line options.
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