update Python package dependency to tiledbsoma 1.1.1 and re-gen noteb…

…ooks (#287)
chanzuckerberg · Mar 24, 2023 · 7805203 · 7805203
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commit 7805203
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diff --git a/api/python/cell_census/pyproject.toml b/api/python/cell_census/pyproject.toml
@@ -34,7 +34,7 @@ dependencies= [
     # NOTE: the tiledbsoma version must be >= to the version used in the Census builder, to
     # ensure that the assets are readable (tiledbsoma supports backward compatible reading).
     # Make sure this version does not fall behind the builder's tiledbsoma version.
-    "tiledbsoma==1.0.0",
+    "tiledbsoma==1.1.1",
     "typing_extensions",
     "s3fs",
     "scikit-misc",

diff --git a/api/python/notebooks/analysis_demo/comp_bio_census_info.ipynb b/api/python/notebooks/analysis_demo/comp_bio_census_info.ipynb
diff --git a/api/python/notebooks/analysis_demo/comp_bio_data_integration_scvi.ipynb b/api/python/notebooks/analysis_demo/comp_bio_data_integration_scvi.ipynb
diff --git a/api/python/notebooks/analysis_demo/comp_bio_explore_and_load_lung_data.ipynb b/api/python/notebooks/analysis_demo/comp_bio_explore_and_load_lung_data.ipynb
diff --git a/api/python/notebooks/analysis_demo/comp_bio_normalizing_full_gene_sequencing.ipynb b/api/python/notebooks/analysis_demo/comp_bio_normalizing_full_gene_sequencing.ipynb