cmzmasek · josemduarte · Nov 24, 2015 · Nov 24, 2015 · Nov 24, 2015 · Nov 24, 2015
diff --git a/.gitignore b/.gitignore
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+/target/
+.classpath
+.project
+.settings
+.idea
diff --git a/README.md b/README.md
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+# Forester
+Forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research.
+
+This repository is a fork of the original Forester project at https://github.com/cmzmasek/forester. 
+
+The only difference of this fork with respect to the original is that the java part of the code has been mavenised for ease of use and better integration with other maven-based projects such as [Biojava](https://github.com/biojava/biojava)
diff --git a/forester/java/archaeopteryx_applets.jar b/forester/java/archaeopteryx_applets.jar
diff --git a/forester/java/classes/com/approximatrix/charting/AbstractChart.class b/forester/java/classes/com/approximatrix/charting/AbstractChart.class
diff --git a/forester/java/classes/com/approximatrix/charting/Axis.class b/forester/java/classes/com/approximatrix/charting/Axis.class
diff --git a/forester/java/classes/com/approximatrix/charting/BufferedChart$RenderThread.class b/forester/java/classes/com/approximatrix/charting/BufferedChart$RenderThread.class
diff --git a/forester/java/classes/com/approximatrix/charting/BufferedChart.class b/forester/java/classes/com/approximatrix/charting/BufferedChart.class
diff --git a/forester/java/classes/com/approximatrix/charting/Chart.class b/forester/java/classes/com/approximatrix/charting/Chart.class
diff --git a/forester/java/classes/com/approximatrix/charting/ChartEncoder.class b/forester/java/classes/com/approximatrix/charting/ChartEncoder.class
diff --git a/forester/java/classes/com/approximatrix/charting/ChartUtilities.class b/forester/java/classes/com/approximatrix/charting/ChartUtilities.class
diff --git a/forester/java/classes/com/approximatrix/charting/CoordSystem.class b/forester/java/classes/com/approximatrix/charting/CoordSystem.class
diff --git a/forester/java/classes/com/approximatrix/charting/DefaultChart.class b/forester/java/classes/com/approximatrix/charting/DefaultChart.class
diff --git a/forester/java/classes/com/approximatrix/charting/EncodingException.class b/forester/java/classes/com/approximatrix/charting/EncodingException.class
diff --git a/forester/java/classes/com/approximatrix/charting/ExtendedChart.class b/forester/java/classes/com/approximatrix/charting/ExtendedChart.class
diff --git a/forester/java/classes/com/approximatrix/charting/GenericChart.class b/forester/java/classes/com/approximatrix/charting/GenericChart.class
diff --git a/forester/java/classes/com/approximatrix/charting/Legend.class b/forester/java/classes/com/approximatrix/charting/Legend.class
diff --git a/forester/java/classes/com/approximatrix/charting/SimpleStrokeDefs.class b/forester/java/classes/com/approximatrix/charting/SimpleStrokeDefs.class
diff --git a/forester/java/classes/com/approximatrix/charting/Title.class b/forester/java/classes/com/approximatrix/charting/Title.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/AbstractCoordSystem.class b/forester/java/classes/com/approximatrix/charting/coordsystem/AbstractCoordSystem.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/BoxCoordSystem.class b/forester/java/classes/com/approximatrix/charting/coordsystem/BoxCoordSystem.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/ClassicCoordSystem.class b/forester/java/classes/com/approximatrix/charting/coordsystem/ClassicCoordSystem.class
diff --git a/...ter/java/classes/com/approximatrix/charting/coordsystem/ClassicCoordSystemUtilities.class b/...ter/java/classes/com/approximatrix/charting/coordsystem/ClassicCoordSystemUtilities.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/CoordSystem.class b/forester/java/classes/com/approximatrix/charting/coordsystem/CoordSystem.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/CoordSystemUtilities.class b/forester/java/classes/com/approximatrix/charting/coordsystem/CoordSystemUtilities.class
diff --git a/forester/java/classes/com/approximatrix/charting/coordsystem/InvisibleCoordSystem.class b/forester/java/classes/com/approximatrix/charting/coordsystem/InvisibleCoordSystem.class
diff --git a/.../java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericTickLocator.class b/.../java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericTickLocator.class
diff --git a/...java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericXTickLocator.class b/...java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericXTickLocator.class
diff --git a/...java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericYTickLocator.class b/...java/classes/com/approximatrix/charting/coordsystem/ticklocator/NumericYTickLocator.class
diff --git a/...r/java/classes/com/approximatrix/charting/coordsystem/ticklocator/ObjectTickLocator.class b/...r/java/classes/com/approximatrix/charting/coordsystem/ticklocator/ObjectTickLocator.class
diff --git a/.../java/classes/com/approximatrix/charting/coordsystem/ticklocator/ObjectXTickLocator.class b/.../java/classes/com/approximatrix/charting/coordsystem/ticklocator/ObjectXTickLocator.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/ChartDataModelEvent.class b/forester/java/classes/com/approximatrix/charting/event/ChartDataModelEvent.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/ChartDataModelListener.class b/forester/java/classes/com/approximatrix/charting/event/ChartDataModelListener.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/InfoAvailableEvent.class b/forester/java/classes/com/approximatrix/charting/event/InfoAvailableEvent.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/InfoAvailableListener.class b/forester/java/classes/com/approximatrix/charting/event/InfoAvailableListener.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/RenderChangeEvent.class b/forester/java/classes/com/approximatrix/charting/event/RenderChangeEvent.class
diff --git a/forester/java/classes/com/approximatrix/charting/event/RenderChangeListener.class b/forester/java/classes/com/approximatrix/charting/event/RenderChangeListener.class
diff --git a/forester/java/classes/com/approximatrix/charting/fixtures/ModelData.class b/forester/java/classes/com/approximatrix/charting/fixtures/ModelData.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/AbstractChartDataModel.class b/forester/java/classes/com/approximatrix/charting/model/AbstractChartDataModel.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/ChartDataModel.class b/forester/java/classes/com/approximatrix/charting/model/ChartDataModel.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/ChartDataModelConstraints.class b/forester/java/classes/com/approximatrix/charting/model/ChartDataModelConstraints.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/DataSet.class b/forester/java/classes/com/approximatrix/charting/model/DataSet.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/DefaultChartDataModel.class b/forester/java/classes/com/approximatrix/charting/model/DefaultChartDataModel.class
diff --git a/...ster/java/classes/com/approximatrix/charting/model/DefaultChartDataModelConstraints.class b/...ster/java/classes/com/approximatrix/charting/model/DefaultChartDataModelConstraints.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/DefaultDataSet.class b/forester/java/classes/com/approximatrix/charting/model/DefaultDataSet.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/EditableChartDataModel.class b/forester/java/classes/com/approximatrix/charting/model/EditableChartDataModel.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/EditableDataSet.class b/forester/java/classes/com/approximatrix/charting/model/EditableDataSet.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/IntegratedImageModel.class b/forester/java/classes/com/approximatrix/charting/model/IntegratedImageModel.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/JDBCPlotter.class b/forester/java/classes/com/approximatrix/charting/model/JDBCPlotter.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/JDBCPlotterException.class b/forester/java/classes/com/approximatrix/charting/model/JDBCPlotterException.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/MultiScatterDataModel$DataSet.class b/forester/java/classes/com/approximatrix/charting/model/MultiScatterDataModel$DataSet.class
diff --git a/...ava/classes/com/approximatrix/charting/model/MultiScatterDataModel$SeriesProperties.class b/...ava/classes/com/approximatrix/charting/model/MultiScatterDataModel$SeriesProperties.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/MultiScatterDataModel.class b/forester/java/classes/com/approximatrix/charting/model/MultiScatterDataModel.class
diff --git a/...ster/java/classes/com/approximatrix/charting/model/MultiScatterDataModelConstraints.class b/...ster/java/classes/com/approximatrix/charting/model/MultiScatterDataModelConstraints.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/ObjectChartDataModel.class b/forester/java/classes/com/approximatrix/charting/model/ObjectChartDataModel.class
diff --git a/...ter/java/classes/com/approximatrix/charting/model/ScatterDataModel$SeriesProperties.class b/...ter/java/classes/com/approximatrix/charting/model/ScatterDataModel$SeriesProperties.class
diff --git a/forester/java/classes/com/approximatrix/charting/model/ScatterDataModel.class b/forester/java/classes/com/approximatrix/charting/model/ScatterDataModel.class
diff --git a/...ster/java/classes/com/approximatrix/charting/model/StackedChartDataModelConstraints.class b/...ster/java/classes/com/approximatrix/charting/model/StackedChartDataModelConstraints.class
diff --git a/.../classes/com/approximatrix/charting/model/threedimensional/AbstractDotPlotDataModel.class b/.../classes/com/approximatrix/charting/model/threedimensional/AbstractDotPlotDataModel.class
diff --git a/...ava/classes/com/approximatrix/charting/model/threedimensional/ColorDotPlotDataModel.class b/...ava/classes/com/approximatrix/charting/model/threedimensional/ColorDotPlotDataModel.class
diff --git a/...lasses/com/approximatrix/charting/model/threedimensional/ColorScaleDotPlotDataModel.class b/...lasses/com/approximatrix/charting/model/threedimensional/ColorScaleDotPlotDataModel.class
diff --git a/...asses/com/approximatrix/charting/model/threedimensional/DotPlotDataModelConstraints.class b/...asses/com/approximatrix/charting/model/threedimensional/DotPlotDataModelConstraints.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/AbstractChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/AbstractChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/AbstractRenderer.class b/forester/java/classes/com/approximatrix/charting/render/AbstractRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/BarChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/BarChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/ChartRenderingHints.class b/forester/java/classes/com/approximatrix/charting/render/ChartRenderingHints.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/ImageRenderer.class b/forester/java/classes/com/approximatrix/charting/render/ImageRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/InterpolationChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/InterpolationChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/LineChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/LineChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/MultiScatterChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/MultiScatterChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/PieChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/PieChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/PlotChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/PlotChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/RadarChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/RadarChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/Renderer.class b/forester/java/classes/com/approximatrix/charting/render/Renderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/RowColorModel.class b/forester/java/classes/com/approximatrix/charting/render/RowColorModel.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/ScatterChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/ScatterChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/StackedBarChartRenderer.class b/forester/java/classes/com/approximatrix/charting/render/StackedBarChartRenderer.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/colorscale/AbstractColorScale.class b/forester/java/classes/com/approximatrix/charting/render/colorscale/AbstractColorScale.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/colorscale/ColorScale.class b/forester/java/classes/com/approximatrix/charting/render/colorscale/ColorScale.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/colorscale/IndexedColorScale.class b/forester/java/classes/com/approximatrix/charting/render/colorscale/IndexedColorScale.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/colorscale/SimpleColorScale.class b/forester/java/classes/com/approximatrix/charting/render/colorscale/SimpleColorScale.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/shape/Diamond2D$1.class b/forester/java/classes/com/approximatrix/charting/render/shape/Diamond2D$1.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/shape/Diamond2D.class b/forester/java/classes/com/approximatrix/charting/render/shape/Diamond2D.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/shape/Triangle2D$1.class b/forester/java/classes/com/approximatrix/charting/render/shape/Triangle2D$1.class
diff --git a/forester/java/classes/com/approximatrix/charting/render/shape/Triangle2D.class b/forester/java/classes/com/approximatrix/charting/render/shape/Triangle2D.class
diff --git a/forester/java/classes/com/approximatrix/charting/swing/AbstractChartPanel.class b/forester/java/classes/com/approximatrix/charting/swing/AbstractChartPanel.class
diff --git a/forester/java/classes/com/approximatrix/charting/swing/BufferedChartPanel.class b/forester/java/classes/com/approximatrix/charting/swing/BufferedChartPanel.class
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diff --git a/forester/java/classes/com/approximatrix/charting/swing/ExtendedChartPanel.class b/forester/java/classes/com/approximatrix/charting/swing/ExtendedChartPanel.class
diff --git a/forester/java/classes/com/approximatrix/charting/swing/InteractiveChartPanel.class b/forester/java/classes/com/approximatrix/charting/swing/InteractiveChartPanel.class
diff --git a/forester/java/classes/com/approximatrix/charting/test/GraphFrame$1.class b/forester/java/classes/com/approximatrix/charting/test/GraphFrame$1.class
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diff --git a/forester/java/classes/com/approximatrix/charting/test/ImageFilter.class b/forester/java/classes/com/approximatrix/charting/test/ImageFilter.class
diff --git a/forester/java/classes/com/itextpdf/text/AGPL.txt b/forester/java/classes/com/itextpdf/text/AGPL.txt
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diff --git a/forester/java/classes/com/itextpdf/text/ExceptionConverter.class b/forester/java/classes/com/itextpdf/text/ExceptionConverter.class
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diff --git a/forester/java/classes/com/itextpdf/text/Font$FontStyle.class b/forester/java/classes/com/itextpdf/text/Font$FontStyle.class
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diff --git a/forester/java/classes/com/itextpdf/text/ImgRaw.class b/forester/java/classes/com/itextpdf/text/ImgRaw.class
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diff --git a/forester/java/classes/com/itextpdf/text/ImgWMF.class b/forester/java/classes/com/itextpdf/text/ImgWMF.class
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diff --git a/forester/java/classes/com/itextpdf/text/ZapfDingbatsNumberList.class b/forester/java/classes/com/itextpdf/text/ZapfDingbatsNumberList.class
diff --git a/forester/java/classes/com/itextpdf/text/error_messages/MessageLocalization.class b/forester/java/classes/com/itextpdf/text/error_messages/MessageLocalization.class
diff --git a/forester/java/classes/com/itextpdf/text/exceptions/BadPasswordException.class b/forester/java/classes/com/itextpdf/text/exceptions/BadPasswordException.class
diff --git a/forester/java/classes/com/itextpdf/text/exceptions/IllegalPdfSyntaxException.class b/forester/java/classes/com/itextpdf/text/exceptions/IllegalPdfSyntaxException.class
diff --git a/forester/java/classes/com/itextpdf/text/exceptions/InvalidPdfException.class b/forester/java/classes/com/itextpdf/text/exceptions/InvalidPdfException.class
diff --git a/forester/java/classes/com/itextpdf/text/exceptions/UnsupportedPdfException.class b/forester/java/classes/com/itextpdf/text/exceptions/UnsupportedPdfException.class
diff --git a/forester/java/classes/com/itextpdf/text/factories/GreekAlphabetFactory.class b/forester/java/classes/com/itextpdf/text/factories/GreekAlphabetFactory.class
diff --git a/forester/java/classes/com/itextpdf/text/factories/RomanAlphabetFactory.class b/forester/java/classes/com/itextpdf/text/factories/RomanAlphabetFactory.class
diff --git a/forester/java/classes/com/itextpdf/text/factories/RomanNumberFactory$RomanDigit.class b/forester/java/classes/com/itextpdf/text/factories/RomanNumberFactory$RomanDigit.class
diff --git a/forester/java/classes/com/itextpdf/text/factories/RomanNumberFactory.class b/forester/java/classes/com/itextpdf/text/factories/RomanNumberFactory.class
diff --git a/forester/java/classes/com/itextpdf/text/html/HtmlEncoder.class b/forester/java/classes/com/itextpdf/text/html/HtmlEncoder.class
diff --git a/forester/java/classes/com/itextpdf/text/html/HtmlTags.class b/forester/java/classes/com/itextpdf/text/html/HtmlTags.class
diff --git a/forester/java/classes/com/itextpdf/text/html/HtmlUtilities.class b/forester/java/classes/com/itextpdf/text/html/HtmlUtilities.class
diff --git a/forester/java/classes/com/itextpdf/text/html/WebColors.class b/forester/java/classes/com/itextpdf/text/html/WebColors.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/CellWrapper.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/CellWrapper.class
diff --git a/...er/java/classes/com/itextpdf/text/html/simpleparser/ChainedProperties$TagAttributes.class b/...er/java/classes/com/itextpdf/text/html/simpleparser/ChainedProperties$TagAttributes.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/ChainedProperties.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/ChainedProperties.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/ElementFactory.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/ElementFactory.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessor.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessor.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$1.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$1.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$10.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$10.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$11.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$11.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$12.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$12.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$13.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$13.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$14.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$14.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$2.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$2.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$3.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$3.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$4.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$4.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$5.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$5.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$6.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$6.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$7.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$7.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$8.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$8.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$9.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors$9.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLTagProcessors.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLWorker.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/HTMLWorker.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageProcessor.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageProcessor.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageProvider.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageProvider.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageStore.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/ImageStore.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/LinkProcessor.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/LinkProcessor.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/StyleSheet.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/StyleSheet.class
diff --git a/forester/java/classes/com/itextpdf/text/html/simpleparser/TableWrapper.class b/forester/java/classes/com/itextpdf/text/html/simpleparser/TableWrapper.class
diff --git a/forester/java/classes/com/itextpdf/text/log/Logger.class b/forester/java/classes/com/itextpdf/text/log/Logger.class
diff --git a/forester/java/classes/com/itextpdf/text/log/LoggerFactory.class b/forester/java/classes/com/itextpdf/text/log/LoggerFactory.class
diff --git a/forester/java/classes/com/itextpdf/text/log/NoOpLogger.class b/forester/java/classes/com/itextpdf/text/log/NoOpLogger.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$1.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$1.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$FieldPosition.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$FieldPosition.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$InstHit.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$InstHit.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$Item.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$RevisionStream.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$RevisionStream.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields$SorterComparator.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields$SorterComparator.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AcroFields.class b/forester/java/classes/com/itextpdf/text/pdf/AcroFields.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ArabicLigaturizer$charstruct.class b/forester/java/classes/com/itextpdf/text/pdf/ArabicLigaturizer$charstruct.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ArabicLigaturizer.class b/forester/java/classes/com/itextpdf/text/pdf/ArabicLigaturizer.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/AsianFontMapper.class b/forester/java/classes/com/itextpdf/text/pdf/AsianFontMapper.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BadPdfFormatException.class b/forester/java/classes/com/itextpdf/text/pdf/BadPdfFormatException.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/Barcode.class b/forester/java/classes/com/itextpdf/text/pdf/Barcode.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/Barcode128.class b/forester/java/classes/com/itextpdf/text/pdf/Barcode128.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/Barcode39.class b/forester/java/classes/com/itextpdf/text/pdf/Barcode39.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeCodabar.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeCodabar.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$DmParams.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$DmParams.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$Placement.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$Placement.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$ReedSolomon.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix$ReedSolomon.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeDatamatrix.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeEAN.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeEAN.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeEANSUPP.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeEANSUPP.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeInter25.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeInter25.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417$Segment.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417$Segment.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417$SegmentList.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417$SegmentList.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodePDF417.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodePostnet.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodePostnet.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BarcodeQRCode.class b/forester/java/classes/com/itextpdf/text/pdf/BarcodeQRCode.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BaseField.class b/forester/java/classes/com/itextpdf/text/pdf/BaseField.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BaseFont$StreamFont.class b/forester/java/classes/com/itextpdf/text/pdf/BaseFont$StreamFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BaseFont.class b/forester/java/classes/com/itextpdf/text/pdf/BaseFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BidiLine.class b/forester/java/classes/com/itextpdf/text/pdf/BidiLine.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/BidiOrder.class b/forester/java/classes/com/itextpdf/text/pdf/BidiOrder.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ByteBuffer.class b/forester/java/classes/com/itextpdf/text/pdf/ByteBuffer.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$DictNumberItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$DictNumberItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$DictOffsetItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$DictOffsetItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$Font.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$Font.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexBaseItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexBaseItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexMarkerItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexMarkerItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexOffsetItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$IndexOffsetItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$Item.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$MarkerItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$MarkerItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$OffsetItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$OffsetItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$RangeItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$RangeItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$StringItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$StringItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$SubrMarkerItem.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$SubrMarkerItem.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt16Item.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt16Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt24Item.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt24Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt32Item.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt32Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt8Item.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont$UInt8Item.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFont.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CFFFontSubset.class b/forester/java/classes/com/itextpdf/text/pdf/CFFFontSubset.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CJKFont.class b/forester/java/classes/com/itextpdf/text/pdf/CJKFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CMYKColor.class b/forester/java/classes/com/itextpdf/text/pdf/CMYKColor.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/CMapAwareDocumentFont.class b/forester/java/classes/com/itextpdf/text/pdf/CMapAwareDocumentFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ColorDetails.class b/forester/java/classes/com/itextpdf/text/pdf/ColorDetails.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ColumnText.class b/forester/java/classes/com/itextpdf/text/pdf/ColumnText.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/DefaultFontMapper$BaseFontParameters.class b/forester/java/classes/com/itextpdf/text/pdf/DefaultFontMapper$BaseFontParameters.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/DefaultFontMapper.class b/forester/java/classes/com/itextpdf/text/pdf/DefaultFontMapper.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/DefaultSplitCharacter.class b/forester/java/classes/com/itextpdf/text/pdf/DefaultSplitCharacter.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/DocumentFont.class b/forester/java/classes/com/itextpdf/text/pdf/DocumentFont.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/EnumerateTTC.class b/forester/java/classes/com/itextpdf/text/pdf/EnumerateTTC.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ExtendedColor.class b/forester/java/classes/com/itextpdf/text/pdf/ExtendedColor.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ExtraEncoding.class b/forester/java/classes/com/itextpdf/text/pdf/ExtraEncoding.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FdfReader.class b/forester/java/classes/com/itextpdf/text/pdf/FdfReader.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FdfWriter$Wrt.class b/forester/java/classes/com/itextpdf/text/pdf/FdfWriter$Wrt.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FdfWriter.class b/forester/java/classes/com/itextpdf/text/pdf/FdfWriter.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FontDetails.class b/forester/java/classes/com/itextpdf/text/pdf/FontDetails.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FontMapper.class b/forester/java/classes/com/itextpdf/text/pdf/FontMapper.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/FontSelector.class b/forester/java/classes/com/itextpdf/text/pdf/FontSelector.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/GlyphList.class b/forester/java/classes/com/itextpdf/text/pdf/GlyphList.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/GrayColor.class b/forester/java/classes/com/itextpdf/text/pdf/GrayColor.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/HyphenationAuto.class b/forester/java/classes/com/itextpdf/text/pdf/HyphenationAuto.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/HyphenationEvent.class b/forester/java/classes/com/itextpdf/text/pdf/HyphenationEvent.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/ICC_Profile.class b/forester/java/classes/com/itextpdf/text/pdf/ICC_Profile.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/IntHashtable$Entry.class b/forester/java/classes/com/itextpdf/text/pdf/IntHashtable$Entry.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/IntHashtable$IntHashtableIterator.class b/forester/java/classes/com/itextpdf/text/pdf/IntHashtable$IntHashtableIterator.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/IntHashtable.class b/forester/java/classes/com/itextpdf/text/pdf/IntHashtable.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/LZWDecoder.class b/forester/java/classes/com/itextpdf/text/pdf/LZWDecoder.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/MappedRandomAccessFile$1.class b/forester/java/classes/com/itextpdf/text/pdf/MappedRandomAccessFile$1.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/MappedRandomAccessFile.class b/forester/java/classes/com/itextpdf/text/pdf/MappedRandomAccessFile.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/MultiColumnText$ColumnDef.class b/forester/java/classes/com/itextpdf/text/pdf/MultiColumnText$ColumnDef.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/MultiColumnText.class b/forester/java/classes/com/itextpdf/text/pdf/MultiColumnText.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/NumberArray.class b/forester/java/classes/com/itextpdf/text/pdf/NumberArray.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/OcspClient.class b/forester/java/classes/com/itextpdf/text/pdf/OcspClient.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/OcspClientBouncyCastle.class b/forester/java/classes/com/itextpdf/text/pdf/OcspClientBouncyCastle.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/OutputStreamCounter.class b/forester/java/classes/com/itextpdf/text/pdf/OutputStreamCounter.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/OutputStreamEncryption.class b/forester/java/classes/com/itextpdf/text/pdf/OutputStreamEncryption.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRAcroForm$FieldInformation.class b/forester/java/classes/com/itextpdf/text/pdf/PRAcroForm$FieldInformation.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRAcroForm.class b/forester/java/classes/com/itextpdf/text/pdf/PRAcroForm.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRIndirectReference.class b/forester/java/classes/com/itextpdf/text/pdf/PRIndirectReference.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRStream.class b/forester/java/classes/com/itextpdf/text/pdf/PRStream.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRTokeniser$TokenType.class b/forester/java/classes/com/itextpdf/text/pdf/PRTokeniser$TokenType.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PRTokeniser.class b/forester/java/classes/com/itextpdf/text/pdf/PRTokeniser.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PageResources.class b/forester/java/classes/com/itextpdf/text/pdf/PageResources.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PatternColor.class b/forester/java/classes/com/itextpdf/text/pdf/PatternColor.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfAcroForm.class b/forester/java/classes/com/itextpdf/text/pdf/PdfAcroForm.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfAction.class b/forester/java/classes/com/itextpdf/text/pdf/PdfAction.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfAnnotation$PdfImportedLink.class b/forester/java/classes/com/itextpdf/text/pdf/PdfAnnotation$PdfImportedLink.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfAnnotation.class b/forester/java/classes/com/itextpdf/text/pdf/PdfAnnotation.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfAppearance.class b/forester/java/classes/com/itextpdf/text/pdf/PdfAppearance.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfArray.class b/forester/java/classes/com/itextpdf/text/pdf/PdfArray.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfBoolean.class b/forester/java/classes/com/itextpdf/text/pdf/PdfBoolean.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfBorderArray.class b/forester/java/classes/com/itextpdf/text/pdf/PdfBorderArray.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfBorderDictionary.class b/forester/java/classes/com/itextpdf/text/pdf/PdfBorderDictionary.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfChunk.class b/forester/java/classes/com/itextpdf/text/pdf/PdfChunk.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfColor.class b/forester/java/classes/com/itextpdf/text/pdf/PdfColor.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfContentByte$GraphicState.class b/forester/java/classes/com/itextpdf/text/pdf/PdfContentByte$GraphicState.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfContentByte.class b/forester/java/classes/com/itextpdf/text/pdf/PdfContentByte.class
diff --git a/forester/java/classes/com/itextpdf/text/pdf/PdfContentParser$1.class b/forester/java/classes/com/itextpdf/text/pdf/PdfContentParser$1.class