TopoMap.jl

Instructions

Requires Boost and mlpack headers.

TopoMap is accessed through a single function project which takes as its only required input a Matrix{Float64}. Optional parameters include dimensions::Int64=2, leafSize::Int64=1, kernel_estimator::String="none", bandwidth::Tuple{Float64, Float64}=(NaN,NaN), and verbose::Bool=false

For examples of how to use TopoMap, see examples\examples.ipynb.

Todos

Performance:

• Rewrite API to split project from 3D projection routines.
• Minimizing allocations:
  • Move to StaticArrays for Points
  • Minimize use of dynamic allocation (unsized vectors, push, append, etc.)