Apply updated formatting

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicCh_steady_solution.ipynb

@@ -115,6 +115,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicCh_steady_solution_solution.ipynb

@@ -115,6 +115,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicRt_steady_solution.ipynb

@@ -94,6 +94,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",
@@ -130,6 +132,7 @@
     "# initialize the model by passing the correct arguments and\n",
     "# keyword arguments.\n",
     "\n",
+    "\n",
     "model = BasicRt(\n",
     "    clock,\n",
     "    grid,\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicRt_steady_solution_solution.ipynb

@@ -93,6 +93,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",
@@ -129,6 +131,7 @@
     "# initialize the model by passing the correct arguments and\n",
     "# keyword arguments.\n",
     "\n",
+    "\n",
     "model = BasicRt(\n",
     "    clock,\n",
     "    grid,\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicVs_steady_solution.ipynb

@@ -125,6 +125,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basicVs_steady_solution_solution.ipynb

@@ -125,6 +125,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basic_steady_solution.ipynb

@@ -114,6 +114,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basic_steady_solution_solution.ipynb

@@ -116,6 +116,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basic_var_m_steady_solution.ipynb

@@ -112,6 +112,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab-terrainbento/coupled_process_elements/model_basic_var_m_steady_solution_solution.ipynb

@@ -112,6 +112,8 @@
    "outputs": [],
    "source": [
     "# we can use an output writer to run until the model reaches steady state.\n",
+    "\n",
+    "\n",
     "class run_to_steady:\n",
     "    def __init__(self, model):\n",
     "        self.model = model\n",

lessons/landlab/landlab/bedrock_landslides_on_dems.ipynb

@@ -250,6 +250,8 @@
    "outputs": [],
    "source": [
     "# These are plotting functions\n",
+    "\n",
+    "\n",
     "def plotting(\n",
     "    grid, topo=True, DA=True, hill_DA=False, flow_metric=\"D8\", hill_flow_metric=\"Quinn\"\n",
     "):\n",

lessons/landlab/landlab/create_a_component.a.ipynb

@@ -197,6 +197,7 @@
    "source": [
     "# Type your code here: calculate time step\n",
     "\n",
+    "\n",
     "for _ in trange(1000):\n",
     "    ...  # Type your code here: calculate diffusion and update *z*\n",
     "\n",

lessons/landlab/landlab/create_a_component.ipynb

@@ -205,6 +205,7 @@
    "source": [
     "# Type your code here: calculate time step\n",
     "\n",
+    "\n",
     "for _ in trange(1000):\n",
     "    ...  # Type your code here: calculate diffusion and update *z*\n",
     "\n",

lessons/python/rainfall_runoff.ipynb

@@ -132,6 +132,8 @@
    "outputs": [],
    "source": [
     "# calculate time to peak\n",
+    "\n",
+    "\n",
     "def calculate_time_to_peak(length, slope, t_rain):\n",
     "    \"\"\"\n",
     "    Calculate the time to peak of a hydrograph using the SCS-CN method.\n",
@@ -165,6 +167,8 @@
    "outputs": [],
    "source": [
     "# calculate peak discharge\n",
+    "\n",
+    "\n",
     "def calculate_peak_discharge(area, w_eff, t_peak):\n",
     "    \"\"\"\n",
     "    Calculate the peak discharge of a hydrograph using the SCS-CN method.\n",
@@ -245,6 +249,8 @@
    "outputs": [],
    "source": [
     "# calculate the runoff hydrograph\n",
+    "\n",
+    "\n",
     "def calculate_runoff_hydrograph(q_peak, t_peak, unit_hydrograph):\n",
     "    \"\"\"\n",
     "    Calculate the runoff hydrograph using the SCS-CN method.\n",
@@ -289,6 +295,8 @@
    "outputs": [],
    "source": [
     "# create a model function\n",
+    "\n",
+    "\n",
     "def scs_curve_number_model(cn, area, length, slope, t_rain, w, unit_hydrograph):\n",
     "    \"\"\"\n",
     "    Model the runoff hydrograph using the SCS-CN method.\n",

pytest.ini

@@ -7,11 +7,7 @@ addopts =
   --strict-markers
   --doctest-modules
   -vvv
-  --ignore-glob=*/Landlab_grids.ipynb
   --ignore-glob=*/practice-your-skills.ipynb
-  --ignore-glob=*/PracticeYourSkills-landlab.ipynb
-  --ignore-glob=*/PracticeYourSkills-Solution\ (DO\ not\ Remove).ipynb
-  --ignore-glob=*/PracticeYourSkills-Solution2\ (do\ NOT\ remove).ipynb
   --ignore-glob=*/Welcome_to_TerrainBento.ipynb
   --ignore-glob=*/bedrockLandslides_on_DEMs.ipynb
   --ignore-glob=*/ku-eml-paleomip.ipynb
@@ -21,3 +17,4 @@ addopts =
   --ignore-glob=*/landlab-fault-scarp-for-espin.ipynb
   --ignore-glob=*/intro-to-grids.ipynb
   --ignore-glob=*/pymt/*.ipynb
+  --ignore-glob=*/python/yet_another_oop.ipynb