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@diegozea diegozea commented Jun 5, 2025

Summary

  • embed full BLOSUM62 matrix and expose it as BLOSUM62_SCORE
  • allow custom substitution matrices for _pairwise_score and sum_of_pairs_score
  • rename the new testset to Sum Of Pairs and add custom matrix tests

Testing

  • julia --project -e 'push!(LOAD_PATH, "test"); using MIToSTests; MIToSTests.retest("MSA"); MIToSTests.retest("MSAQuality")'

https://chatgpt.com/codex/tasks/task_b_6840bfee53a0832d8ba48f2d82e149fe

@diegozea diegozea merged commit e7c237d into master Jun 10, 2025
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