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Bump the python group across 1 directory with 5 updates #1436

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Updates the requirements on fsspec[http], tzdata, plotly, xarray and zarr to permit the latest version.
Updates fsspec[http] to 2025.2.0

Commits

Updates tzdata to 2025.1

Release notes

Sourced from tzdata's releases.

2025.1: Release of upstream tzdata 2025a

Version 2025.1

Upstream version 2025a released 2025-01-15T18:47:24+00:00

Briefly:

Paraguay adopts permanent -03 starting spring 2024. Improve pre-1991 data for the Philippines. Etc/Unknown is now reserved.

Changes to future timestamps

Paraguay will stop changing its clocks after the spring-forward transition on 2024-10-06, so it is now permanently at -03. (Thanks to Heitor David Pinto and Even Scharning.) This affects timestamps starting 2025-03-22, as well as the obsolescent tm_isdst flags starting 2024-10-15.

Changes to past timestamps

Correct timestamps for the Philippines before 1900, and from 1937 through 1990. (Thanks to P Chan for the heads-up and citations.) This includes adjusting local mean time before 1899; fixing transitions in September 1899, January 1937, and June 1954; adding transitions in December 1941, November 1945, March and September 1977, and May and July 1990; and removing incorrect transitions in March and September 1978.

Changes to data

Add zone1970.tab lines for the Concordia and Eyre Bird Observatory research stations. (Thanks to Derick Rethans and Jule Dabars.)

Changes to documentation

The name Etc/Unknown is now reserved: it will not be used by TZDB. This is for compatibility with CLDR, which uses the string "Etc/Unknown" for an unknown or invalid timezone. (Thanks to Justin Grant, Mark Davis, and Guy Harris.)

Cite Internet RFC 9636, which obsoletes RFC 8536 for TZif format.

Changelog

Sourced from tzdata's changelog.

Version 2025.1

Upstream version 2025a released 2025-01-15T18:47:24+00:00

Briefly:

Paraguay adopts permanent -03 starting spring 2024. Improve pre-1991 data for the Philippines. Etc/Unknown is now reserved.

Changes to future timestamps

Paraguay will stop changing its clocks after the spring-forward transition on 2024-10-06, so it is now permanently at -03. (Thanks to Heitor David Pinto and Even Scharning.) This affects timestamps starting 2025-03-22, as well as the obsolescent tm_isdst flags starting 2024-10-15.

Changes to past timestamps

Correct timestamps for the Philippines before 1900, and from 1937 through 1990. (Thanks to P Chan for the heads-up and citations.) This includes adjusting local mean time before 1899; fixing transitions in September 1899, January 1937, and June 1954; adding transitions in December 1941, November 1945, March and September 1977, and May and July 1990; and removing incorrect transitions in March and September 1978.

Changes to data

Add zone1970.tab lines for the Concordia and Eyre Bird Observatory research stations. (Thanks to Derick Rethans and Jule Dabars.)

Changes to documentation

The name Etc/Unknown is now reserved: it will not be used by TZDB. This is for compatibility with CLDR, which uses the string "Etc/Unknown" for an unknown or invalid timezone. (Thanks to Justin Grant, Mark Davis, and Guy Harris.)

Cite Internet RFC 9636, which obsoletes RFC 8536 for TZif format.

Version 2024.2

Upstream version 2024b released 2024-09-04T19:27:47+00:00

Briefly:

Improve historical data for Mexico, Mongolia, and Portugal. System V names are now obsolescent. The main data form now uses %z. The code now conforms to RFC 8536 for early timestamps. Support POSIX.1-2024, which removes asctime_r and ctime_r. Assume POSIX.2-1992 or later for shell scripts. SUPPORT_C89 now defaults to 1.

... (truncated)

Commits
  • 0ccabea Bump release to 2025.1
  • d0078ca Update tzdata to version '2025a'
  • 5bf324b Use proper syntax for multiline env variable
  • a178a14 Fix setup_cfg_fmt pre-commit environment
  • 1397de8 Update pre-commit config
  • 0cce78d Add automatic PR action
  • 3b721cd Don't update the repo unless we need to
  • d913020 Update tzdata to 2024b
  • fdd075c Remove POSIXRULES= from make invocation
  • See full diff in compare view

Updates plotly to 6.0.0

Release notes

Sourced from plotly's releases.

v6.0.0

[6.0.0] - 2025-01-28

Added

  • Add plotly[express] extra for easily installing Plotly Express dependencies [#4644]
  • Add subtitle attribute to all Plotly Express traces [#4830].

Removed

  • Drop deprecated pointcloud and heatmapgl traces from the API [#4815]
  • Drop tenacity dependency [#4831]
  • Drop support for Jupyter Notebook version 6 and earlier [#4822]. The minimum supported version is now 7.0.0.

Updated

  • Update Plotly.js from version 2.34.2 to version 3.0.0 See the plotly.js CHANGELOG for more information. These changes are reflected in the auto-generated plotly.graph_objects module. Notable changes include:
    • Make offsetgroup work with barmode "stacked" and "relative" for bar traces [#7009]
    • Drop support for deprecated attributes titlefont, titleposition, titleside, and titleoffset [#7212].
    • Drop deprecated pointcloud and heatmapgl traces and gl2d subplots [#7213]
    • Drop support for deprecated bardir attribute (use orientation instead) [#7214]
    • Drop support for deprecated annotation.ref attribute (use annotation.xref and annotation.yref instead) [#7215]
    • Drop support for deprecated error bar opacity attribute (use alpha channel of error bar color attribute instead) [#7214]
    • Drop support for deprecated attribute gl3d.cameraposition (use gl3d.camera instead) [#7217]
    • Drop deprecated plot3dPixelRatio from config [#7231]
    • Drop deprecated zauto, zmin and zmax from the surface trace [#7234]
    • Drop deprecated autotick attributes from cartesian axes [#7236]
    • Drop transforms from the API [#7240, #7254]
  • Deprecate Mapbox-based traces.[#4900]. See the MapLibre Migration page for details on migrating from Mapbox to Maplibre.
  • Update plotly.py to use base64 encoding of typed arrays e.g. numpy in plotly JSON to keep precision intact and improve performance [#4470].
  • Make plotly-express dataframe agnostic via Narwhals [#4790].
  • Update go.FigureWidget to use anywidget [#4823]
  • Use modern native ES6 import to load plotly.js bundle instead of requirejs which is no longer under active development [#4736]

Fixed

  • Fix a bug in JupyterLab >= 4 and Jupyter Notebook >= 7 that caused LaTeX to not render in plotly charts [#4763].
  • Fix go.FigureWidget.show to return FigureWidget instead of displaying Figure [#4869]
Changelog

Sourced from plotly's changelog.

[6.0.0] - 2025-01-28

Added

  • Add plotly[express] extra for easily installing Plotly Express dependencies [#4644]
  • Add subtitle attribute to all Plotly Express traces [#4830].

Removed

  • Drop deprecated pointcloud and heatmapgl traces from the API [#4815]
  • Drop tenacity dependency [#4831]
  • Drop support for Jupyter Notebook version 6 and earlier [#4822]. The minimum supported version is now 7.0.0.

Updated

  • Update Plotly.js from version 2.34.2 to version 3.0.0 See the plotly.js CHANGELOG for more information. These changes are reflected in the auto-generated plotly.graph_objects module. Notable changes include:
    • Make offsetgroup work with barmode "stacked" and "relative" for bar traces [#7009]
    • Drop support for deprecated attributes titlefont, titleposition, titleside, and titleoffset [#7212].
    • Drop deprecated pointcloud and heatmapgl traces and gl2d subplots [#7213]
    • Drop support for deprecated bardir attribute (use orientation instead) [#7214]
    • Drop support for deprecated annotation.ref attribute (use annotation.xref and annotation.yref instead) [#7215]
    • Drop support for deprecated error bar opacity attribute (use alpha channel of error bar color attribute instead) [#7214]
    • Drop support for deprecated attribute gl3d.cameraposition (use gl3d.camera instead) [#7217]
    • Drop deprecated plot3dPixelRatio from config [#7231]
    • Drop deprecated zauto, zmin and zmax from the surface trace [#7234]
    • Drop deprecated autotick attributes from cartesian axes [#7236]
    • Drop transforms from the API [#7240, #7254]
  • Deprecate Mapbox-based traces.[#4900]. See the MapLibre Migration page for details on migrating from Mapbox to Maplibre.
  • Update plotly.py to use base64 encoding of typed arrays e.g. numpy in plotly JSON to keep precision intact and improve performance [#4470].
  • Make plotly-express dataframe agnostic via Narwhals [#4790].
  • Update go.FigureWidget to use anywidget [#4823]
  • Use modern native ES6 import to load plotly.js bundle instead of requirejs which is no longer under active development [#4736]

Fixed

  • Fix a bug in JupyterLab >= 4 and Jupyter Notebook >= 7 that caused LaTeX to not render in plotly charts [#4763].
  • Fix go.FigureWidget.show to return FigureWidget instead of displaying Figure [#4869]

[5.24.1] - 2024-09-12

Updated

  • Updated Plotly.js from version 2.35.0 to version 3.0.0-rc.0. See the plotly.js CHANGELOG for more information.

[5.24.0] - 2024-08-29

Added

  • New px functions for maps: scatter_map, line_map, choropleth_map, and density_map.

Updated

  • Updated Plotly.js from version 2.34.0 to version 2.35.0. See the plotly.js CHANGELOG for more information. These changes are reflected in the auto-generated plotly.graph_objects module. Notable changes include:

... (truncated)

Commits
  • 49581b8 version changes for v6.0.0
  • 769d12f Merge pull request #4987 from plotly/upgrade-plotlyjs-3.0
  • fe7147b Update to plotly.js 3.0.0
  • 0ca20aa Merge pull request #4976 from plotly/update-docs-for-dataframes
  • 357ad0c Update doc/python/px-arguments.md
  • 2aa76bf add note on dicts and arrays
  • 3d36f14 Merge pull request #4966 from plotly/merge-recent-docs-changes
  • d831305 Merge pull request #4969 from plotly/marthacryan-patch-1
  • 666c025 Merge pull request #4968 from plotly/figure-widget-updates
  • 3410e9d Remove instructions to change version in README
  • Additional commits viewable in compare view

Updates xarray to 2025.1.2

Changelog

Sourced from xarray's changelog.

How to issue an xarray release in 16 easy steps

Time required: about an hour.

These instructions assume that upstream refers to the main repository:

$ git remote -v
{...}
upstream        https://github.com/pydata/xarray (fetch)
upstream        https://github.com/pydata/xarray (push)

  1. Ensure your main branch is synced to upstream:

    git switch main
git pull upstream main

  2. Add a list of contributors. First fetch all previous release tags so we can see the version number of the last release was:

    git fetch upstream --tags

    Then run

    python ci/release_contributors.py

    (needs gitpython and toolz / cytoolz)

    and copy the output.

  3. Write a release summary: ~50 words describing the high level features. This will be used in the release emails, tweets, GitHub release notes, etc.

  4. Look over whats-new.rst and the docs. Make sure "What's New" is complete (check the date!) and add the release summary at the top. Things to watch out for:

    • Important new features should be highlighted towards the top.
    • Function/method references should include links to the API docs.
    • Sometimes notes get added in the wrong section of whats-new, typically due to a bad merge. Check for these before a release by using git diff, e.g., git diff v{YYYY.MM.X-1} whats-new.rst where {YYYY.MM.X-1} is the previous release.

  5. Open a PR with the release summary and whatsnew changes; in particular the release headline should get feedback from the team on what's important to include.

... (truncated)

Commits

Updates zarr to 3.0.4

Release notes

Sourced from zarr's releases.

v3.0.4

What's Changed

Full Changelog: zarr-developers/zarr-python@v3.0.3...v3.0.4

Changelog

Sourced from zarr's changelog.

Release notes

.. towncrier release notes start

3.0.3 (2025-02-14)

Features


- Improves performance of FsspecStore.delete_dir for remote filesystems supporting concurrent/batched deletes, e.g., s3fs. (:issue:`2661`)
- Added :meth:`zarr.config.enable_gpu` to update Zarr's configuration to use GPUs. (:issue:`2751`)
- Avoid reading chunks during writes where possible. :issue:`757` (:issue:`2784`)
- :py:class:`LocalStore` learned to ``delete_dir``. This makes array and group deletes more efficient. (:issue:`2804`)
- Add `zarr.testing.strategies.array_metadata` to generate ArrayV2Metadata and ArrayV3Metadata instances. (:issue:`2813`)
- Add arbitrary `shards` to Hypothesis strategy for generating arrays. (:issue:`2822`)

Bugfixes

  • Fixed bug with Zarr using device memory, instead of host memory, for storing metadata when using GPUs. (:issue:2751)
  • The array returned by zarr.empty and an empty zarr.core.buffer.cpu.NDBuffer will now be filled with the specified fill value, or with zeros if no fill value is provided. This fixes a bug where Zarr format 2 data with no fill value was written with un-predictable chunk sizes. (:issue:2755)
  • Fix zip-store path checking for stores with directories listed as files. (:issue:2758)
  • Use removeprefix rather than replace when removing filename prefixes in FsspecStore.list (:issue:2778)
  • Enable automatic removal of needs release notes with labeler action (:issue:2781)
  • Use the proper label config (:issue:2785)
  • Alters the behavior of create_array to ensure that any groups implied by the array's name are created if they do not already exist. Also simplifies the type signature for any function that takes an ArrayConfig-like object. (:issue:2795)
  • Enitialise empty chunks to the default fill value during writing and add default fill values for datetime, timedelta, structured, and other (void* fixed size) data types (:issue:2799)
  • Ensure utf8 compliant strings are used to construct numpy arrays in property-based tests (:issue:2801)
  • Fix pickling for ZipStore (:issue:2807)
  • Update numcodecs to not overwrite codec configuration ever. Closes :issue:2800. (:issue:2811)
  • Fix fancy indexing (e.g. arr[5, [0, 1]]) with the sharding codec (:issue:2817)

Improved Documentation


- Added new user guide on :ref:`user-guide-gpu`. (:issue:`2751`)

3.0.2 (2025-01-31)


Features



</tr></table> 
</code></pre>
</blockquote>
<p>... (truncated)</p>
</details>
<details>
<summary>Commits</summary>

<ul>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/8d2fb47252a7ed5eb163ccfb0401e4e0486f72f6&quot;&gt;&lt;code&gt;8d2fb47&lt;/code&gt;&lt;/a> feat/batch creation (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2665&quot;&gt;#2665&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/8b59a38463dca7b3c908aa3db7d5321a80a3c285&quot;&gt;&lt;code&gt;8b59a38&lt;/code&gt;&lt;/a> Fix a bug when setting complete chunks (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2851&quot;&gt;#2851&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/96c967786c42e235f4d07dfcdd2a3a72bcd508e1&quot;&gt;&lt;code&gt;96c9677&lt;/code&gt;&lt;/a> don't serialize empty tuples for v2 filters, and warn when reading such metad...</li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/e8bfb6484aeb543c21b9b0f6de2e0f0a034fc5d7&quot;&gt;&lt;code&gt;e8bfb64&lt;/code&gt;&lt;/a> Unnecessary lambda expression (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2828&quot;&gt;#2828&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/5a36e175325c1f6e55b0638009b8aa7e5ab89a05&quot;&gt;&lt;code&gt;5a36e17&lt;/code&gt;&lt;/a> Changelog for v3.0.3 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2836&quot;&gt;#2836&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/8ad4cd69335a32d85b0b1c380572596b1e9f26b7&quot;&gt;&lt;code&gt;8ad4cd6&lt;/code&gt;&lt;/a> Run fsspec tests in min_deps env (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2835&quot;&gt;#2835&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/48f7c9af3b49e3221c65c3447e869437c0fb7575&quot;&gt;&lt;code&gt;48f7c9a&lt;/code&gt;&lt;/a> Feat: improves delete_dir for s3fs-backed FsspecStore (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2661&quot;&gt;#2661&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/23abb5b0cfb8b9565985e7e682a498405d630b34&quot;&gt;&lt;code&gt;23abb5b&lt;/code&gt;&lt;/a> Add more setitem property tests (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2825&quot;&gt;#2825&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/f8bc3153162e85ad41f62cdb6c693239868b85c6&quot;&gt;&lt;code&gt;f8bc315&lt;/code&gt;&lt;/a> create_array creates explicit groups (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2795&quot;&gt;#2795&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/zarr-python/commit/3c25dacdd41e9a67f32c2cfac364292bb34d9370&quot;&gt;&lt;code&gt;3c25dac&lt;/code&gt;&lt;/a> Add shards to array strategy (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/2822&quot;&gt;#2822&lt;/a&gt;)&lt;/li>

<li>Additional commits viewable in <a href="https://github.com/zarr-developers/zarr-python/compare/v2.13.0...v3.0.4&quot;&gt;compare view</a></li>

</ul>

</details>


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Bump the python group across 1 directory with 5 updates
0dbfc84 
Updates the requirements on [fsspec[http]](https://github.com/fsspec/filesystem_spec), [tzdata](https://github.com/python/tzdata), [plotly](https://github.com/plotly/plotly.py), [xarray](https://github.com/pydata/xarray) and [zarr](https://github.com/zarr-developers/zarr-python) to permit the latest version.

Updates `fsspec[http]` to 2025.2.0
- [Commits](fsspec/filesystem_spec@2023.1.0...2025.2.0)

Updates `tzdata` to 2025.1
- [Release notes](https://github.com/python/tzdata/releases)
- [Changelog](https://github.com/python/tzdata/blob/master/NEWS.md)
- [Commits](python/tzdata@2024.2...2025.1)

Updates `plotly` to 6.0.0
- [Release notes](https://github.com/plotly/plotly.py/releases)
- [Changelog](https://github.com/plotly/plotly.py/blob/main/CHANGELOG.md)
- [Commits](plotly/plotly.py@v5.24.1...v6.0.0)

Updates `xarray` to 2025.1.2
- [Release notes](https://github.com/pydata/xarray/releases)
- [Changelog](https://github.com/pydata/xarray/blob/main/HOW_TO_RELEASE.md)
- [Commits](pydata/xarray@v2023.01.0...v2025.01.2)

Updates `zarr` to 3.0.4
- [Release notes](https://github.com/zarr-developers/zarr-python/releases)
- [Changelog](https://github.com/zarr-developers/zarr-python/blob/main/docs/release-notes.rst)
- [Commits](zarr-developers/zarr-python@v2.13.0...v3.0.4)

---
updated-dependencies:
- dependency-name: fsspec[http]
  dependency-type: direct:production
  dependency-group: python
- dependency-name: tzdata
  dependency-type: direct:production
  dependency-group: python
- dependency-name: plotly
  dependency-type: direct:production
  dependency-group: python
- dependency-name: xarray
  dependency-type: direct:production
  dependency-group: python
- dependency-name: zarr
  dependency-type: direct:production
  dependency-group: python
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Feb 24, 2025
@dependabot dependabot bot mentioned this pull request Feb 24, 2025
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