Removes parallel execution from unit tests #5
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| name: Building and deploying docs | |
| on: | |
| # Trigger the workflow on push | |
| push: | |
| # To the develop and master branches | |
| branches: [develop, master, docs] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| env: | |
| # Set the environment variables to be used in all jobs defined in this workflow | |
| # Set the CI_BRANCH environment variable to be the branch name | |
| # Set the NOTEBOOKS_DIR environment variable to be the directory containing the Jupyter notebooks | |
| CI_BRANCH: ${{ github.head_ref || github.ref_name }} | |
| NOTEBOOKS_DIR: tutorials | |
| jobs: | |
| # Job 1: Build the static files for the documentation site | |
| build-docs: | |
| runs-on: macos-14 # Use macOS to switch to dark mode for Plotly charts | |
| steps: | |
| - name: Cancel previous workflow runs | |
| uses: n1hility/cancel-previous-runs@v2 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| # Without this step, GITHUB_REPOSITORY is not accessible from mkdocs.yml | |
| - name: Get GitHub repository | |
| run: echo "GITHUB_REPOSITORY=$GITHUB_REPOSITORY" >> $GITHUB_ENV | |
| # Save the latest release version of easyscience/EasyDiffractionLib to RELEASE_VERSION | |
| # RELEASE_VERSION is used in the mkdocs.yml file to set release_version. | |
| # The release_version is then needed to display the latest release version in the index.md file | |
| - name: Get the latest release version of EasyDiffraction Library | |
| run: | | |
| git clone --depth 1 https://github.com/easyscience/EasyDiffractionLib . | |
| git fetch --tags | |
| echo "RELEASE_VERSION=$(git describe --tags --abbrev=0)" >> $GITHUB_ENV | |
| # Activate dark mode to create documentation with Plotly charts in dark mode | |
| # Need a better solution to automatically switch the chart colour theme based on the mkdocs material switcher | |
| # Something similar to mkdocs_plotly_plugin https://haoda-li.github.io/mkdocs-plotly-plugin/, | |
| # but for generating documentation from notepads | |
| - name: Activate dark mode | |
| run: | | |
| brew install dark-mode | |
| dark-mode status | |
| dark-mode on | |
| dark-mode status | |
| - name: Check-out repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Python environment | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Upgrade package installer for Python | |
| run: python -m pip install --upgrade pip | |
| # Install EasyDiffraction Library to run Jupyter notebooks | |
| # Install with the 'charts' and 'docs' extras | |
| - name: Install EasyDiffraction Library and its dependencies | |
| run: pip install -r requirements.txt | |
| # Clone assets extra from: | |
| # - easyscience/assets-docs | |
| # - easyscience/assets-branding | |
| - name: Clone easyscience/assets-docs and easyscience/assets-branding | |
| run: | | |
| cd .. | |
| git clone https://github.com/easyscience/assets-docs.git | |
| git clone https://github.com/easyscience/assets-branding.git | |
| # Add the extra files from the easyscience/assets-docs repository | |
| - name: Add files from easyscience/assets-docs files | |
| run: | | |
| cp -R ../assets-docs/docs/assets/ docs/assets/ | |
| cp -R ../assets-docs/includes/ includes/ | |
| cp -R ../assets-docs/overrides/ overrides/ | |
| # Add the extra files from the easyscience/assets-branding repository | |
| - name: Add files from easyscience/assets-branding files | |
| run: | | |
| mkdir -p docs/assets/images/ | |
| cp ../assets-branding/easydiffraction/hero/dark.png docs/assets/images/hero_dark.png | |
| cp ../assets-branding/easydiffraction/hero/light.png docs/assets/images/hero_light.png | |
| cp ../assets-branding/easydiffraction/logos/dark.svg docs/assets/images/logo_dark.svg | |
| cp ../assets-branding/easydiffraction/logos/light.svg docs/assets/images/logo_light.svg | |
| cp ../assets-branding/easydiffraction/icons/color.png docs/assets/images/favicon.png | |
| mkdir -p overrides/.icons/ | |
| cp ../assets-branding/easydiffraction/icons/bw.svg overrides/.icons/easydiffraction.svg | |
| cp ../assets-branding/easyscience-org/icons/eso-icon_bw.svg overrides/.icons/easyscience.svg | |
| # Copy Jupyter notebooks from the project to the docs folder | |
| # The notebooks are used to generate the documentation | |
| - name: Convert ${{ env.NOTEBOOKS_DIR }}/*.py to docs/${{env.NOTEBOOKS_DIR }}/*.ipynb | |
| run: | | |
| cp -R ${{ env.NOTEBOOKS_DIR }}/data docs/${{ env.NOTEBOOKS_DIR }}/ | |
| jupytext ${{ env.NOTEBOOKS_DIR }}/*.py --to ipynb | |
| mv ${{ env.NOTEBOOKS_DIR }}/*.ipynb docs/${{ env.NOTEBOOKS_DIR }}/ | |
| # The following step is needed to avoid the following message during the build: | |
| # "Matplotlib is building the font cache; this may take a moment" | |
| - name: Pre-build site step | |
| run: | | |
| export PYTHONPATH=$(pwd)/src:$PYTHONPATH | |
| python -c "import easydiffraction" | |
| # Create the mkdocs.yml configuration file | |
| # The file is created by merging two files: | |
| # - assets-docs/mkdocs.yml - the common configuration (theme, plugins, etc.) | |
| # - docs/mkdocs.yml - the project-specific configuration (project name, TOC, etc.) | |
| - name: Create mkdocs.yml file | |
| run: python tools/create_mkdocs-yml.py | |
| # Build the static files | |
| # Input: docs/ directory containing the Markdown files | |
| # Output: site/ directory containing the generated HTML files | |
| - name: Build site with MkDocs | |
| run: | | |
| export JUPYTER_PLATFORM_DIRS=1 | |
| export PYTHONPATH=$(pwd)/src:$PYTHONPATH | |
| mkdocs build | |
| # Set up the Pages action to configure the static files to be deployed | |
| # NOTE: The repository must have GitHub Pages enabled and configured to build using GitHub Actions | |
| # This can be done via https://github.com/easyscience/diffraction-lib/settings/pages | |
| # Select: Build and deploy - Source - GitHub Actions | |
| - name: Setup GitHub Pages | |
| uses: actions/configure-pages@v5 | |
| # Upload the static files from the site/ directory to be used in the next job | |
| # This artifact is named github-pages and is a single gzip archive containing a single tar file | |
| # The artifact is then used in the next job by actions/deploy-pages to deploy the static files to GitHub Pages | |
| # Unfortunately, the artifact is not available for download, so extra steps below are needed to do similar things | |
| - name: | |
| Upload built site as artifact for | |
| easyscience.github.io/EasyDiffractionLib (all branches) | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: site/ | |
| # Upload the static files from the site/ directory to be used in the next job | |
| # This extra step is needed to allow the download of the artifact in the next job | |
| # for pushing its content to the branch named 'gh_pages' | |
| - name: | |
| Upload built site as artifact for gh_pages (master branch) | |
| if: ${{ env.CI_BRANCH == 'master' }} | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: artifact # name of the artifact (without the extension zip) | |
| path: site/ | |
| if-no-files-found: 'error' | |
| compression-level: 0 | |
| # Job 2: Deploy the static files | |
| deploy-docs: | |
| needs: build-docs # previous job 'build-docs' need to be finished first | |
| # Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
| permissions: | |
| contents: read | |
| pages: write # to deploy to Pages | |
| id-token: write # to verify the deployment, originates from an appropriate source | |
| # Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued. | |
| # However, do NOT cancel in-progress runs as we want to allow these production deployments to complete. | |
| concurrency: | |
| group: 'pages' | |
| cancel-in-progress: false | |
| # Deploy to the github-pages environment | |
| environment: | |
| name: github-pages # Artifact name | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Deploy the static files created in the previous job to GitHub Pages | |
| # To allow the deployment of the static files to GitHub Pages, no | |
| # restrictions on the branch name need to be set for desired branches on | |
| # https://github.com/easyscience/diffraction-lib/settings/environments | |
| # Currently, only develop and master branches are allowed to deploy to GitHub Pages | |
| # Deployed pages are available at https://easyscience.github.io/diffraction-lib | |
| - name: Deploy to easyscience.github.io/diffraction-lib (all branches) | |
| uses: actions/deploy-pages@v4 | |
| # Download built site as artifact from a previous job for gh_pages (master branch) | |
| - name: Download built site from previous job (master branch) | |
| if: ${{ env.CI_BRANCH == 'master' }} | |
| uses: actions/download-artifact@v4 | |
| with: # name or path are taken from the upload step of the previous job | |
| name: artifact | |
| path: site/ # directory to extract downloaded zipped artifacts | |
| # Push the site files created in the previous job to the gh_pages branch | |
| # To be able to push to the gh_pages branch, the personal GitHub API access | |
| # token GH_API_PERSONAL_ACCSESS_TOKEN must be set for this repository via | |
| # https://github.com/easyscience/diffraction-lib/settings/secrets/actions | |
| # This branch is used to deploy the site to the custom domain. | |
| # Deploying is done with a webhook: | |
| # https://github.com/easyscience/diffraction-lib/settings/hooks | |
| # This is done for the gh_pages branch when the site is tested with a step above | |
| - name: | |
| Deploy to gh_pages branch to trigger deployment to custom domain (master branch) | |
| if: ${{ env.CI_BRANCH == 'master' }} | |
| uses: s0/git-publish-subdir-action@develop | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GH_API_PERSONAL_ACCSESS_TOKEN }} | |
| REPO: self | |
| BRANCH: gh_pages | |
| FOLDER: site |