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Loading HELM with monomers with multi-character IDs without brackets #2835

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AlexeyGirin opened this issue Mar 27, 2025 · 0 comments
Open

Loading HELM with monomers with multi-character IDs without brackets #2835

AlexeyGirin opened this issue Mar 27, 2025 · 0 comments
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HELM Bucket: Bugs related to Export to HELM format Priority: Medium Severity: Medium Medium level visibility to the user
Milestone
Indigo-1.32.0-rc....

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@AlexeyGirin
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AlexeyGirin commented Mar 27, 2025 •
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Background
HELM specification ultimately demand to enclose monomers with multi-character IDs in square brackets “[]”.
Image

But HELM WebEditor allows to load HELM string with monomers with multi-character IDs without brackets.
In addition: User's HELMs usually comes without brackets e.g. PEPTIDE1{meI.Aca.Thr_PO3H2.Aca.D-Tyr_Et.N.T.dK}$$$$

Solution
Allow to load HELM string with monomers with multi-character IDs without brackets.

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Labels
HELM Bucket: Bugs related to Export to HELM format Priority: Medium Severity: Medium Medium level visibility to the user
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Milestone
Indigo-1.32.0-rc.1 (current)
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@AlexeyGirin