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  1. single_cell_rna_sequencing single_cell_rna_sequencing Public

    Workflows for sc/snRNAseq from count data.

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  2. paired_end_sra_to_raw_count_table paired_end_sra_to_raw_count_table Public

    [VALID FOR PAIRED-END READS] Complete automation pipeline for multiple SRRXXXXXXXX folders (each containing *.sra files) to raw count *.csv using packages available in Conda.

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  3. complete_sra_to_count complete_sra_to_count Public

    Valid workflow for SRA accession to count table - for both single and paired end reads.

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