Analysis of hu.MAP 2.0-related data via active Jupyter sessions provided via MyBinder.org. Adapt the demonstrations to analyze your favorite proteins and create reports.
tl;dr:
Click any launch binder badge on this page to use the demonstrations inside your browser.
humap2-binder: Jupyter notebook environment for analysis of hu.MAP 2.0-related data.
A launchable, working Jupyter-based environment that has a collection of demonstrations of analysis of hu.MAP 2.0-related data served via MyBinder.org.
You can also easily adapt the demonstrations to analyze your favorite proteins or create reports featuring your proteins of interest.
Meant to be self-contained and ready-to-go. No installations or copying of notebooks is necessary if launch binder is clicked. Everything will just work. Of course, static versions of the notebooks can also be used. I recommend rendering the static versions by placing the URLs into the nbviewer. The views provided by nbviewer look best and Github's rendering often times out (your mileage may vary).
My humap3-binder repository is where most of the related effort takes place, and will continue to take place, as it is where I started adding programmatic access to the hu.MAP-related data, and so be sure to see there for more beyond what you find here. Importantly, I realized that myself and others might be curious how the author-provided data has changed between the two versions, and so this repository serves as a foundation for wrangling the hu.MAP 2.0-related data. It will parallel the current state of the humap3-binder repository, although that one is expected to expand soon using the foundation provided here to allow comparison between the results.