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Using data from hu.MAP 3.0 with the convenience of Python and Jupyter.

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humap3-binder

Analysis of hu.MAP 3.0-related data via active Jupyter sessions provided via MyBinder.org. Adapt the demonstrations to analyze your favorite proteins and create reports.

Binder

tl;dr:
Click any launch binder badge on this page to use the demonstrations inside your browser.


humap3-binder: Jupyter notebook environment for analysis of hu.MAP 3.0-related data.

A launchable, working Jupyter-based environment that has a collection of demonstrations of analysis of hu.MAP 3.0-related data served via MyBinder.org.

You can also easily adapt the demonstrations to analyze your favorite proteins or create reports featuring your proteins of interest.

Meant to be self-contained and ready-to-go. No installations or copying of notebooks is necessary if launch binder is clicked. Everything will just work. Of course, static versions of the notebooks can also be used. I recommend rendering the static versions by placing the URLs into the nbviewer. The views provided by nbviewer look best and Github's rendering often times out (your mileage may vary).


Related

my Unipressed-binder repository demonstrates using the package Unipressed to access information from UniProt.