docs: add missing workflow features and regenerate llms-full.txt

[seanmartinsmith]

Problem

website/static/llms-full.txt is generated from the versioned docs, but the source docs in website/versioned_docs/version-1.0.0/workflows/ are missing documentation for features that are fully implemented in the Go source. Agents relying on llms-full.txt for context conclude these features do not exist.

Verified 0 hits in llms-full.txt for: swarm, convoy, cook, extends, condition, loop, squash, burn, promote, for_each.

Root Cause

The generation script (scripts/generate-llms-full.sh) works correctly - it picks up all files. The gap is in the source markdown files themselves, which were written for an earlier version of the workflow system and never updated as features shipped.

Fix

Updated 3 workflow docs and regenerated llms-full.txt:

formulas.md (+205 lines of content):

• Convoy formula type (multi-agent coordination) - from internal/formula/types.go TypeConvoy
• Formula inheritance (extends field) - from Formula.Extends in types.go
• Conditional steps (condition field) - from Step.Condition and FilterStepsByCondition
• Loop/iteration (count, range, until) - from LoopSpec struct in types.go
• Runtime expansion (on_complete with for_each) - from OnCompleteSpec in types.go
• bd cook command (compile-time vs runtime modes) - from cmd/bd/cook.go
• Expanded gate types and aspect composition

wisps.md (rewritten):

• Squash lifecycle (bd mol squash - promote to persistent) - from cmd/bd/wisp.go lines 56, 532
• Burn lifecycle (bd mol burn - delete without trace) - from wisp.go line 57, 305
• Garbage collection (bd mol wisp gc) - from wisp.go GC subcommand
• Corrected storage model: wisps use Ephemeral=true in main DB, not separate .beads-wisp/ directory
• Updated commands to match actual CLI surface (bd mol wisp not bd wisp)

index.md (expanded command table):

• Added swarm commands (validate, create, status, list) - from cmd/bd/swarm.go
• Added cook, squash, burn, gc, bond, formula list commands

llms-full.txt: Regenerated via scripts/generate-llms-full.sh (6070 -> 6275 lines).

Test Plan

• All new terms searchable in regenerated llms-full.txt: swarm (8), convoy (4), cook (14), extends (2), condition (16), loop (12), squash (9), burn (9), promote (6), for_each (2)
• scripts/generate-llms-full.sh runs cleanly (verified)
• No broken internal links in updated docs
• Docusaurus build succeeds

Context

Closes #3244. Source of truth for all additions is internal/formula/types.go (848 lines), cmd/bd/swarm.go (1192 lines), cmd/bd/cook.go (1047 lines), and cmd/bd/wisp.go (832 lines).

[codecov-commenter]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ All tests successful. No failed tests found.

📢 Thoughts on this report? Let us know!