V1.2#29

Merged

natalie-23-gill merged 30 commits into

mainfrom

Mar 26, 2026

Commits on Aug 30, 2025

add MSE and MSD evaluation

Reuben Thomas
authored and
Reuben Thomas
committed

Commits on Sep 1, 2025

updated NAMESPACE

Reuben Thomas
authored and
Reuben Thomas
committed

Commits on Sep 3, 2025

add Hellinger and KL divergence metrics

Reuben Thomas
authored and
Reuben Thomas
committed

Commits on Sep 10, 2025

add functions to compute modularity score

Reuben Thomas
authored and
Reuben Thomas
committed

Commits on Sep 11, 2025

correct ARI estimate for comparing singleton clusters

Reuben Thomas
authored and
Reuben Thomas
committed

Commits on Dec 2, 2025

v1.1 updates, fix CyTOF
natalie-23-gill
committed

Commits on Dec 15, 2025

Commits on Dec 16, 2025

fix docs
natalie-23-gill
committed

Commits on Dec 17, 2025

Reorganize package, fix the flipped sign for KL divergence
natalie-23-gill
committed

Commits on Dec 20, 2025

Add KL/Hellinger metric functions and rank-based resolution suggestion with visualizations
natalie-23-gill
committed

Commits on Feb 1, 2026

Commits on Feb 13, 2026

improve verbosity
natalie-23-gill
committed

Commits on Feb 18, 2026

add another method for suggest resolution
natalie-23-gill
committed

Commits on Feb 19, 2026

logging and performance improvements
natalie-23-gill
committed

Commits on Feb 20, 2026

Commits on Mar 13, 2026

bump R version
natalie-23-gill
committed

Commits on Mar 26, 2026

use simpler thresholds
natalie-23-gill
committed