Merge pull request #903 from glotzerlab/release/2.8.0

Release/2.8.0

.mailmap

@@ -53,6 +53,8 @@ James Proctor <[email protected]> James Proctor <[email protected]
 Andrew Kerr <[email protected]> Andrew Kerr <[email protected]>
 Andrew Kerr <[email protected]> Andrew Kerr <[email protected]>
 Charlotte Shiqi Zhao <[email protected]> Charlottez112 <[email protected]>
+Charlotte Shiqi Zhao <[email protected]> Charlotte Shiqi Zhao <[email protected]>
 Emily Siew <[email protected]> esiew <[email protected]>
 DomFijan <[email protected]> domagoj <[email protected]>
 DomFijan <[email protected]> Domagoj Fijan <[email protected]>
+Dylan Marx <[email protected]> marxd1 <[email protected]>

ChangeLog.md

@@ -4,18 +4,25 @@ The format is based on
 and this project adheres to
 [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## next -- yyyy-mm-dd
+## v2.8.0 -- 2022-01-25
 
 ### Added
 * `freud.diffraction.StaticStructureFactorDirect` class (unstable) can be used to compute the static structure factor S(k) by sampling reciprocal space vectors.
 * Python 3.10 is supported.
+* Documentation examples are tested with pytest.
+* Use clang-format as pre-commit hook.
+* Add related tools section to the documentation.
 
 ### Fixed
+* `freud.diffraction.DiffractionPattern` normalization changed such that `S(k=0) = N`.
 * Added error checking for `r_min`, `r_max` arguments in `freud.density.RDF`, `freud.locality.NeighborList`, `freud.locality.NeighborQuery`, and `freud.density.LocalDensity` classes.
-* Doctests are now run with pytest.
-* Cleaned up tests for the static structure factor classes.
 * CMake build system only uses references to TBB target.
 
+### Changed
+* Re-organized tests for the static structure factor classes.
+* Move `util::Histogram<T>::Axes` to `util::Axes`.
+* Use new `flake8` plugin `flake8-force` for linting Cython code.
+
 ## v2.7.0 -- 2021-10-01
 
 ### Added

contributors.txt

@@ -1,51 +1,55 @@
-  2156	Bradley Dice <[email protected]>
-  2134	Vyas Ramasubramani <[email protected]>
+  2332	Bradley Dice <[email protected]>
+  2135	Vyas Ramasubramani <[email protected]>
   1030	Eric Harper <[email protected]>
    456	Jin Soo Ihm <[email protected]>
    294	Joshua A. Anderson <[email protected]>
    240	Matthew Spellings <[email protected]>
    167	Kelly Wang <[email protected]>
+   118	DomFijan <[email protected]>
+   111	Tommy Waltmann <[email protected]>
    110	Erin Teich <[email protected]>
+    97	dependabot <dependabot[bot]@users.noreply.github.com>
     86	Brandon Butler <[email protected]>
-    70	dependabot <dependabot[bot]@users.noreply.github.com>
     66	M. Eric Irrgang <[email protected]>
-    61	Charlotte Shiqi Zhao <[email protected]>
+    62	Charlotte Shiqi Zhao <[email protected]>
     53	Chrisy Du <[email protected]>
-    42	Tommy Waltmann <[email protected]>
     41	Yezhi Jin <[email protected]>
     40	Antonio Osorio <[email protected]>
-    39	DomFijan <[email protected]>
     35	Michael Stryk <[email protected]>
+    34	pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
     31	Richmond Newman <[email protected]>
+    26	Andrew Kerr <[email protected]>
+    25	Andrew Kerr <[email protected]>
     25	Carl Simon Adorf <[email protected]>
     22	Jens Glaser <[email protected]>
-    22	Andrew Kerr <[email protected]>
-    19	Tim Moore <[email protected]>
-    18	pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
+    20	Tim Moore <[email protected]>
     13	Pavel Buslaev <[email protected]>
     10	Benjamin Schultz <[email protected]>
     10	Bryan VanSaders <[email protected]>
     10	Matt Palathingal <[email protected]>
-     9	Mike Henry <[email protected]>
      9	Andrew Karas <[email protected]>
+     9	Mike Henry <[email protected]>
+     9	SyedZiaul <[email protected]>
      8	Fengyi Gao <[email protected]>
      8	Ryan Marson <[email protected]>
-     6	Pengji Zhou <zhoupj@umich.edu>
+     6	Allen LaCour <alacour@umich.edu>
      6	James Proctor <[email protected]>
+     6	Pengji Zhou <[email protected]>
      6	Tom Grubb <[email protected]>
      6	Yina Geng <[email protected]>
-     6	Allen LaCour <[email protected]>
-     5	Carolyn Phillips <[email protected]>
      5	Alex Dutton <[email protected]>
+     5	Carolyn Phillips <[email protected]>
      4	Ben Swerdlow <[email protected]>
      4	James Antonaglia <[email protected]>
-     4	William Zygmunt <[email protected]>
      4	Mayank Agrawal <[email protected]>
-     3	Rose Cersonsky <rosecers@umich.edu>
+     4	William Zygmunt <wzygmunt@umich.edu>
      3	Greg van Anders <[email protected]>
+     3	Rose Cersonsky <[email protected]>
      3	Wenbo Shen <[email protected]>
      2	Emily Siew <[email protected]>
      2	Maya Martirossyan <[email protected]>
-     1	Paul Dodd <[email protected]>
-     1	Patrick Lawton <[email protected]>
+     1	Dylan Marx <[email protected]>
      1	Jiwoong Yu <[email protected]>
+     1	Patrick Lawton <[email protected]>
+     1	Paul Dodd <[email protected]>
+     1	Roy Kid <[email protected]>

doc/source/conf.py

@@ -70,8 +70,8 @@
 # built documents.
 #
 # version and release are set the same for this package.
-version = "2.7.0"
-release = "2.7.0"
+version = "2.8.0"
+release = "2.8.0"
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

freud/__init__.py

@@ -23,7 +23,7 @@
 # automatic selection runs, the user cannot change it.
 set_num_threads(0)
 
-__version__ = "2.7.0"
+__version__ = "2.8.0"
 
 __all__ = [
     "__version__",

setup.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 2.7.0
+current_version = 2.8.0
 commit = True
 tag = False
 message = Bump up to version {new_version}.
@@ -11,7 +11,7 @@ force-check = True
 exclude = .eggs,*.egg,build,extern,doc/source/gettingstarted/examples
 select = E,F,W
 ignore = E203,E225,E226,E227,E741,E999,W503,W504
-per-file-ignores =
+per-file-ignores = 
 	freud/__init__.py: F401
 	freud/*.pxd: E402
 

setup.py

@@ -6,7 +6,7 @@
 
 from skbuild import setup as skbuild_setup
 
-version = "2.7.0"
+version = "2.8.0"
 
 # Read README for PyPI, fallback to short description if it fails.
 description = "Powerful, efficient trajectory analysis in scientific Python."