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Get Data Validation Code in a Github Repo (On Enterprise)

Status: Open.

#31 In karissawhiting/oncokbR;

· karissawhiting opened on Oct 14, 2024

Investigate "Unknown" Differences Between Python Results and Package Results

Status: Open.

#30 In karissawhiting/oncokbR;

· karissawhiting opened on Oct 14, 2024

Variant Classifications in MSK IMPACT Not Found In Consequence Map

Status: Open.

#28 In karissawhiting/oncokbR;

· david-nemirovsky opened on Aug 1, 2024

Make utility functions to simplify repeated code

Status: Open.

#26 In karissawhiting/oncokbR;

· karissawhiting opened on May 28, 2024

Compare Annotated Results from CDSI, Python Annotator and {oncokbR}

Status: Open.

#25 In karissawhiting/oncokbR;

· karissawhiting opened on May 7, 2024

Annotator returns NAs when processing data from CDSI

Status: Open.

#24 In karissawhiting/oncokbR;

· karissawhiting opened on Mar 5, 2024

All examples using annotate_mutations(oncokbR::blca_mutations[1:10, ]) produce error bc missing tumor_type var

Status: Open.

#23 In karissawhiting/oncokbR;

· hfuchs5 opened on Feb 8, 2024

Check Intragenic Loss as Fusion Type

Status: Open.

#22 In karissawhiting/oncokbR;

· karissawhiting opened on Nov 9, 2023

Make sure tumor type messaging is clear

Status: Open.

#21 In karissawhiting/oncokbR;

· karissawhiting opened on Nov 9, 2023

Check handling of intragenic fusions

Status: Open.

#20 In karissawhiting/oncokbR;

· karissawhiting opened on Oct 17, 2023

variant_classification column not found

Status: Open.

#15 In karissawhiting/oncokbR;

· JoanneF1229 opened on Oct 10, 2023

Add unit tests and check functionality & docs of functions

Status: Open.

#14 In karissawhiting/oncokbR;

· karissawhiting opened on Oct 3, 2023